Gene : Cre17.g701350 C. reinhardtii v5.6
Defline:  (1 of 1) K10743 - ribonuclease H2 subunit A (RNASEH2A) Genomic Order:  117
Name:  ? Cre17.g701350 Secondary Identifier:  ? PAC:30781815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g701350 0.5kb upstream 0.5kb upstream 4612 true chromosome_17: 754259-758870 Chlamydomonas reinhardtii
Cre17.g701350 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 754259-754758 Chlamydomonas reinhardtii
Cre17.g701350 0.5kb downstream 0.5kb downstream 4612 true chromosome_17: 754759-759370 Chlamydomonas reinhardtii
Cre17.g701350 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 758871-759370 Chlamydomonas reinhardtii
Cre17.g701350 1.0kb upstream 1.0kb upstream 5112 true chromosome_17: 753759-758870 Chlamydomonas reinhardtii
Cre17.g701350 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 753759-754758 Chlamydomonas reinhardtii
Cre17.g701350 1.0kb downstream 1.0kb downstream 5112 true chromosome_17: 754759-759870 Chlamydomonas reinhardtii
Cre17.g701350 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 758871-759870 Chlamydomonas reinhardtii
Cre17.g701350 2.0kb upstream 2.0kb upstream 6112 true chromosome_17: 752759-758870 Chlamydomonas reinhardtii
Cre17.g701350 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 752759-754758 Chlamydomonas reinhardtii
Cre17.g701350 2.0kb downstream 2.0kb downstream 6112 true chromosome_17: 754759-760870 Chlamydomonas reinhardtii
Cre17.g701350 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 758871-760870 Chlamydomonas reinhardtii
Cre17.g701350 5.0kb upstream 5.0kb upstream 9112 true chromosome_17: 749759-758870 Chlamydomonas reinhardtii
Cre17.g701350 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 749759-754758 Chlamydomonas reinhardtii
Cre17.g701350 5.0kb downstream 5.0kb downstream 9112 true chromosome_17: 754759-763870 Chlamydomonas reinhardtii
Cre17.g701350 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 758871-763870 Chlamydomonas reinhardtii
Cre17.g701350 10.0kb upstream 10.0kb upstream 14112 true chromosome_17: 744759-758870 Chlamydomonas reinhardtii
Cre17.g701350 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 744759-754758 Chlamydomonas reinhardtii
Cre17.g701350 10.0kb downstream 10.0kb downstream 14112 true chromosome_17: 754759-768870 Chlamydomonas reinhardtii
Cre17.g701350 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 758871-768870 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124097823 5260 Chlorophyte View MSA
123427271 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.003     Low Low
cufflinks 0.763       High
cufflinks 0.619        
cufflinks 0.438        
cufflinks 0.317        
cufflinks 0.439        
cufflinks 0.962       High
cufflinks 0.657        
cufflinks 0.003     Low Low
cufflinks 0.015     Low  
cufflinks 0.172        
cufflinks 0.438        
cufflinks 0.171        
cufflinks 0.294        
cufflinks 0.285        
cufflinks 0.006     Low Low
cufflinks 0.001     Low Low
cufflinks 0.388        
cufflinks 0.004     Low Low
cufflinks 0.033     Low  
cufflinks 0.098     Low  
cufflinks 0.008     Low Low
cufflinks 0.946       High
cufflinks 0.257        
cufflinks 0.011     Low  
cufflinks 1.19453 0.0 2.48772   Low
cufflinks 2.92513 0.0 6.14137    
cufflinks 2.23676 0.0 5.44302    
cufflinks 1.75647 0.0 3.5393    
cufflinks 4.54083 0.346332 8.73533   High

0 Strain