Gene : CAV1 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g720600 Defline:  (1 of 5) PTHR10037//PTHR10037:SF218 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM // SUBFAMILY NOT NAMED
Genomic Order:  547 Name:  ? Cre17.g720600
Secondary Identifier:  ? PAC:30782719
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g720600 0.5kb upstream 0.5kb upstream 14942 true chromosome_17: 3032446-3047387 Chlamydomonas reinhardtii
Cre17.g720600 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 3032446-3032945 Chlamydomonas reinhardtii
Cre17.g720600 0.5kb downstream 0.5kb downstream 14942 true chromosome_17: 3032946-3047887 Chlamydomonas reinhardtii
Cre17.g720600 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 3047388-3047887 Chlamydomonas reinhardtii
Cre17.g720600 1.0kb upstream 1.0kb upstream 15442 true chromosome_17: 3031946-3047387 Chlamydomonas reinhardtii
Cre17.g720600 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 3031946-3032945 Chlamydomonas reinhardtii
Cre17.g720600 1.0kb downstream 1.0kb downstream 15442 true chromosome_17: 3032946-3048387 Chlamydomonas reinhardtii
Cre17.g720600 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 3047388-3048387 Chlamydomonas reinhardtii
Cre17.g720600 2.0kb upstream 2.0kb upstream 16442 true chromosome_17: 3030946-3047387 Chlamydomonas reinhardtii
Cre17.g720600 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 3030946-3032945 Chlamydomonas reinhardtii
Cre17.g720600 2.0kb downstream 2.0kb downstream 16442 true chromosome_17: 3032946-3049387 Chlamydomonas reinhardtii
Cre17.g720600 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 3047388-3049387 Chlamydomonas reinhardtii
Cre17.g720600 5.0kb upstream 5.0kb upstream 19442 true chromosome_17: 3027946-3047387 Chlamydomonas reinhardtii
Cre17.g720600 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 3027946-3032945 Chlamydomonas reinhardtii
Cre17.g720600 5.0kb downstream 5.0kb downstream 19442 true chromosome_17: 3032946-3052387 Chlamydomonas reinhardtii
Cre17.g720600 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 3047388-3052387 Chlamydomonas reinhardtii
Cre17.g720600 10.0kb upstream 10.0kb upstream 24442 true chromosome_17: 3022946-3047387 Chlamydomonas reinhardtii
Cre17.g720600 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 3022946-3032945 Chlamydomonas reinhardtii
Cre17.g720600 10.0kb downstream 10.0kb downstream 24442 true chromosome_17: 3032946-3057387 Chlamydomonas reinhardtii
Cre17.g720600 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 3047388-3057387 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113187 5260 Chlorophyte View MSA
123423640 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.448       Low
cufflinks 1.074        
cufflinks 0.634        
cufflinks 1.008        
cufflinks 0.752        
cufflinks 0.592        
cufflinks 1.131        
cufflinks 1.144        
cufflinks 0.671        
cufflinks 0.209       Low
cufflinks 1.012        
cufflinks 1.065        
cufflinks 0.335       Low
cufflinks 0.677        
cufflinks 1.211        
cufflinks 0.501        
cufflinks 0.876        
cufflinks 0.668        
cufflinks 0.337       Low
cufflinks 1.406       High
cufflinks 1.278       High
cufflinks 0.999        
cufflinks 0.829        
cufflinks 1.143        
cufflinks 1.245        
cufflinks 1.62966 0.276544 2.98277   High
cufflinks 2.21222 0.498015 3.92642    
cufflinks 5.37335 0.0 10.809    
cufflinks 2.40054 0.373692 4.42738   High
cufflinks 2.10211 0.397843 3.80638   Low

0 Strain