Gene : PAO2 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g724600 Defline:  (1 of 3) K13071 - pheophorbide a oxygenase (PAO, ACD1)
Genomic Order:  630 Name:  ? Cre17.g724600
Secondary Identifier:  ? PAC:30782160
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6927 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g724600 0.5kb upstream 0.5kb upstream 4952 true chromosome_17: 3439856-3444807 Chlamydomonas reinhardtii
Cre17.g724600 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 3444308-3444807 Chlamydomonas reinhardtii
Cre17.g724600 0.5kb downstream 0.5kb downstream 4952 true chromosome_17: 3439356-3444307 Chlamydomonas reinhardtii
Cre17.g724600 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 3439356-3439855 Chlamydomonas reinhardtii
Cre17.g724600 1.0kb upstream 1.0kb upstream 5452 true chromosome_17: 3439856-3445307 Chlamydomonas reinhardtii
Cre17.g724600 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 3444308-3445307 Chlamydomonas reinhardtii
Cre17.g724600 1.0kb downstream 1.0kb downstream 5452 true chromosome_17: 3438856-3444307 Chlamydomonas reinhardtii
Cre17.g724600 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 3438856-3439855 Chlamydomonas reinhardtii
Cre17.g724600 2.0kb upstream 2.0kb upstream 6452 true chromosome_17: 3439856-3446307 Chlamydomonas reinhardtii
Cre17.g724600 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 3444308-3446307 Chlamydomonas reinhardtii
Cre17.g724600 2.0kb downstream 2.0kb downstream 6452 true chromosome_17: 3437856-3444307 Chlamydomonas reinhardtii
Cre17.g724600 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 3437856-3439855 Chlamydomonas reinhardtii
Cre17.g724600 5.0kb upstream 5.0kb upstream 9452 true chromosome_17: 3439856-3449307 Chlamydomonas reinhardtii
Cre17.g724600 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 3444308-3449307 Chlamydomonas reinhardtii
Cre17.g724600 5.0kb downstream 5.0kb downstream 9452 true chromosome_17: 3434856-3444307 Chlamydomonas reinhardtii
Cre17.g724600 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 3434856-3439855 Chlamydomonas reinhardtii
Cre17.g724600 10.0kb upstream 10.0kb upstream 14452 true chromosome_17: 3439856-3454307 Chlamydomonas reinhardtii
Cre17.g724600 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 3444308-3454307 Chlamydomonas reinhardtii
Cre17.g724600 10.0kb downstream 10.0kb downstream 14452 true chromosome_17: 3429856-3444307 Chlamydomonas reinhardtii
Cre17.g724600 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 3429856-3439855 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113463 5260 Chlorophyte View MSA
123429167 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.304        
cufflinks 1.876        
cufflinks 1.019       Low
cufflinks 3.409        
cufflinks 2.067        
cufflinks 1.931        
cufflinks 1.599        
cufflinks 3.84        
cufflinks 5.608       High
cufflinks 1.662        
cufflinks 1.845        
cufflinks 3.291        
cufflinks 2.514        
cufflinks 1.978        
cufflinks 3.395        
cufflinks 3.845        
cufflinks 4.258        
cufflinks 2.102        
cufflinks 1.099       Low
cufflinks 1.791        
cufflinks 3.283        
cufflinks 5.937       High
cufflinks 1.16       Low
cufflinks 3.096        
cufflinks 5.879       High
cufflinks 4.99744 0.794682 9.2002    
cufflinks 3.35232 0.00598999 6.69865   Low
cufflinks 4.02352 0.0 9.51361    
cufflinks 5.3185 0.115789 10.5212   High
cufflinks 6.48534 0.0 13.2064    

0 Strain