Gene : Cre17.g728200 C. reinhardtii v5.6
Defline:  (1 of 1) K11664 - vacuolar protein sorting-associated protein 72 (VPS72, TCFL1, YL1) Genomic Order:  706
Name:  ? Cre17.g728200 Secondary Identifier:  ? PAC:30782729
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g728200 0.5kb upstream 0.5kb upstream 3876 true chromosome_17: 3853354-3857229 Chlamydomonas reinhardtii
Cre17.g728200 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 3856730-3857229 Chlamydomonas reinhardtii
Cre17.g728200 0.5kb downstream 0.5kb downstream 3876 true chromosome_17: 3852854-3856729 Chlamydomonas reinhardtii
Cre17.g728200 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 3852854-3853353 Chlamydomonas reinhardtii
Cre17.g728200 1.0kb upstream 1.0kb upstream 4376 true chromosome_17: 3853354-3857729 Chlamydomonas reinhardtii
Cre17.g728200 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 3856730-3857729 Chlamydomonas reinhardtii
Cre17.g728200 1.0kb downstream 1.0kb downstream 4376 true chromosome_17: 3852354-3856729 Chlamydomonas reinhardtii
Cre17.g728200 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 3852354-3853353 Chlamydomonas reinhardtii
Cre17.g728200 2.0kb upstream 2.0kb upstream 5376 true chromosome_17: 3853354-3858729 Chlamydomonas reinhardtii
Cre17.g728200 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 3856730-3858729 Chlamydomonas reinhardtii
Cre17.g728200 2.0kb downstream 2.0kb downstream 5376 true chromosome_17: 3851354-3856729 Chlamydomonas reinhardtii
Cre17.g728200 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 3851354-3853353 Chlamydomonas reinhardtii
Cre17.g728200 5.0kb upstream 5.0kb upstream 8376 true chromosome_17: 3853354-3861729 Chlamydomonas reinhardtii
Cre17.g728200 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 3856730-3861729 Chlamydomonas reinhardtii
Cre17.g728200 5.0kb downstream 5.0kb downstream 8376 true chromosome_17: 3848354-3856729 Chlamydomonas reinhardtii
Cre17.g728200 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 3848354-3853353 Chlamydomonas reinhardtii
Cre17.g728200 10.0kb upstream 10.0kb upstream 13376 true chromosome_17: 3853354-3866729 Chlamydomonas reinhardtii
Cre17.g728200 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 3856730-3866729 Chlamydomonas reinhardtii
Cre17.g728200 10.0kb downstream 10.0kb downstream 13376 true chromosome_17: 3843354-3856729 Chlamydomonas reinhardtii
Cre17.g728200 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 3843354-3853353 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110288 5260 Chlorophyte View MSA
123424205 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.532        
cufflinks 10.243       High
cufflinks 8.408        
cufflinks 6.989        
cufflinks 7.137        
cufflinks 7.441        
cufflinks 11.232       High
cufflinks 9.968       High
cufflinks 5.754        
cufflinks 3.011       Low
cufflinks 3.604       Low
cufflinks 8.501        
cufflinks 4.887        
cufflinks 7.986        
cufflinks 6.15        
cufflinks 6.661        
cufflinks 4.701        
cufflinks 7.375        
cufflinks 3.564       Low
cufflinks 9.211       High
cufflinks 6.315        
cufflinks 4.223       Low
cufflinks 7.538        
cufflinks 6.552        
cufflinks 4.773        
cufflinks 9.25084 1.48328 17.0184    
cufflinks 18.1078 4.91458 31.301    
cufflinks 7.26153 0.0 15.0168   Low
cufflinks 10.0898 1.57423 18.6053    
cufflinks 9.0718 1.68224 16.4614    

0 Strain