Gene : RPN2 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g727950 Defline:  (1 of 1) K03032 - 26S proteasome regulatory subunit N2 (PSMD1, RPN2)
Genomic Order:  701 Name:  ? Cre17.g727950
Secondary Identifier:  ? PAC:30782172
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g727950 0.5kb upstream 0.5kb upstream 10694 true chromosome_17: 3829980-3840673 Chlamydomonas reinhardtii
Cre17.g727950 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 3829980-3830479 Chlamydomonas reinhardtii
Cre17.g727950 0.5kb downstream 0.5kb downstream 10694 true chromosome_17: 3830480-3841173 Chlamydomonas reinhardtii
Cre17.g727950 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 3840674-3841173 Chlamydomonas reinhardtii
Cre17.g727950 1.0kb upstream 1.0kb upstream 11194 true chromosome_17: 3829480-3840673 Chlamydomonas reinhardtii
Cre17.g727950 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 3829480-3830479 Chlamydomonas reinhardtii
Cre17.g727950 1.0kb downstream 1.0kb downstream 11194 true chromosome_17: 3830480-3841673 Chlamydomonas reinhardtii
Cre17.g727950 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 3840674-3841673 Chlamydomonas reinhardtii
Cre17.g727950 2.0kb upstream 2.0kb upstream 12194 true chromosome_17: 3828480-3840673 Chlamydomonas reinhardtii
Cre17.g727950 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 3828480-3830479 Chlamydomonas reinhardtii
Cre17.g727950 2.0kb downstream 2.0kb downstream 12194 true chromosome_17: 3830480-3842673 Chlamydomonas reinhardtii
Cre17.g727950 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 3840674-3842673 Chlamydomonas reinhardtii
Cre17.g727950 5.0kb upstream 5.0kb upstream 15194 true chromosome_17: 3825480-3840673 Chlamydomonas reinhardtii
Cre17.g727950 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 3825480-3830479 Chlamydomonas reinhardtii
Cre17.g727950 5.0kb downstream 5.0kb downstream 15194 true chromosome_17: 3830480-3845673 Chlamydomonas reinhardtii
Cre17.g727950 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 3840674-3845673 Chlamydomonas reinhardtii
Cre17.g727950 10.0kb upstream 10.0kb upstream 20194 true chromosome_17: 3820480-3840673 Chlamydomonas reinhardtii
Cre17.g727950 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 3820480-3830479 Chlamydomonas reinhardtii
Cre17.g727950 10.0kb downstream 10.0kb downstream 20194 true chromosome_17: 3830480-3850673 Chlamydomonas reinhardtii
Cre17.g727950 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 3840674-3850673 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109540 5260 Chlorophyte View MSA
123424090 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.776        
cufflinks 4.864       High
cufflinks 4.935       High
cufflinks 3.875        
cufflinks 4.151        
cufflinks 3.529        
cufflinks 5.445       High
cufflinks 4.976       High
cufflinks 2.975        
cufflinks 1.181       Low
cufflinks 3.11        
cufflinks 3.722        
cufflinks 2.451        
cufflinks 3.554        
cufflinks 2.721        
cufflinks 2.752        
cufflinks 1.711        
cufflinks 3.782        
cufflinks 0.764       Low
cufflinks 2.009        
cufflinks 2.628        
cufflinks 0.913       Low
cufflinks 3.655        
cufflinks 4.203        
cufflinks 1.432       Low
cufflinks 17.3764 0.507285 34.2454   Low
cufflinks 21.3796 5.49914 37.26    
cufflinks 21.908 0.0 44.5828    
cufflinks 13.6638 0.79073 26.5369   Low
cufflinks 22.505 2.92584 42.0841   High

0 Strain