Gene : SSD1 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g093500 Defline:  (1 of 1) PF00873 - AcrB/AcrD/AcrF family (ACR_tran)
Genomic Order:  459 Name:  ? Cre02.g093500
Secondary Identifier:  ? PAC:30786143
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g093500 0.5kb upstream 0.5kb upstream 7912 true chromosome_2: 2693246-2701157 Chlamydomonas reinhardtii
Cre02.g093500 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 2693246-2693745 Chlamydomonas reinhardtii
Cre02.g093500 0.5kb downstream 0.5kb downstream 7912 true chromosome_2: 2693746-2701657 Chlamydomonas reinhardtii
Cre02.g093500 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 2701158-2701657 Chlamydomonas reinhardtii
Cre02.g093500 1.0kb upstream 1.0kb upstream 8412 true chromosome_2: 2692746-2701157 Chlamydomonas reinhardtii
Cre02.g093500 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 2692746-2693745 Chlamydomonas reinhardtii
Cre02.g093500 1.0kb downstream 1.0kb downstream 8412 true chromosome_2: 2693746-2702157 Chlamydomonas reinhardtii
Cre02.g093500 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 2701158-2702157 Chlamydomonas reinhardtii
Cre02.g093500 2.0kb upstream 2.0kb upstream 9412 true chromosome_2: 2691746-2701157 Chlamydomonas reinhardtii
Cre02.g093500 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 2691746-2693745 Chlamydomonas reinhardtii
Cre02.g093500 2.0kb downstream 2.0kb downstream 9412 true chromosome_2: 2693746-2703157 Chlamydomonas reinhardtii
Cre02.g093500 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 2701158-2703157 Chlamydomonas reinhardtii
Cre02.g093500 5.0kb upstream 5.0kb upstream 12412 true chromosome_2: 2688746-2701157 Chlamydomonas reinhardtii
Cre02.g093500 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 2688746-2693745 Chlamydomonas reinhardtii
Cre02.g093500 5.0kb downstream 5.0kb downstream 12412 true chromosome_2: 2693746-2706157 Chlamydomonas reinhardtii
Cre02.g093500 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 2701158-2706157 Chlamydomonas reinhardtii
Cre02.g093500 10.0kb upstream 10.0kb upstream 17412 true chromosome_2: 2683746-2701157 Chlamydomonas reinhardtii
Cre02.g093500 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 2683746-2693745 Chlamydomonas reinhardtii
Cre02.g093500 10.0kb downstream 10.0kb downstream 17412 true chromosome_2: 2693746-2711157 Chlamydomonas reinhardtii
Cre02.g093500 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 2701158-2711157 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112532 5260 Chlorophyte View MSA
123429105 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.4       High
cufflinks 0.367       High
cufflinks 0.009     Low  
cufflinks 0.001     Low Low
cufflinks 0.169        
cufflinks 0.003     Low  
cufflinks 0.397       High
cufflinks 0.003     Low  
cufflinks 0.056     Low  
cufflinks 0.001     Low Low
cufflinks 0.001     Low Low
cufflinks 0.003     Low  
cufflinks 0.006     Low  
cufflinks 0.001     Low Low
cufflinks 0.741       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.003     Low  
cufflinks 0.084     Low  
cufflinks 0.666       High
cufflinks 0.001     Low Low
cufflinks 0.006     Low  
cufflinks 0.606       High
cufflinks 0.0163856 0.0 0.0621481 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.21922 0.0 14.5093    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0846891 0.0 0.235005 Low  

0 Strain