Gene : HSK1 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g082200 Defline:  (1 of 4) 2.7.1.39 - Homoserine kinase
Genomic Order:  210 Name:  ? Cre02.g082200
Secondary Identifier:  ? PAC:30785317
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii HOMOSER-THRESYN-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-3001 Chlamydomonas reinhardtii pathologic  
Creinhardtii THRESYN-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g082200 0.5kb upstream 0.5kb upstream 4726 true chromosome_2: 1213581-1218306 Chlamydomonas reinhardtii
Cre02.g082200 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 1217807-1218306 Chlamydomonas reinhardtii
Cre02.g082200 0.5kb downstream 0.5kb downstream 4726 true chromosome_2: 1213081-1217806 Chlamydomonas reinhardtii
Cre02.g082200 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 1213081-1213580 Chlamydomonas reinhardtii
Cre02.g082200 1.0kb upstream 1.0kb upstream 5226 true chromosome_2: 1213581-1218806 Chlamydomonas reinhardtii
Cre02.g082200 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 1217807-1218806 Chlamydomonas reinhardtii
Cre02.g082200 1.0kb downstream 1.0kb downstream 5226 true chromosome_2: 1212581-1217806 Chlamydomonas reinhardtii
Cre02.g082200 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 1212581-1213580 Chlamydomonas reinhardtii
Cre02.g082200 2.0kb upstream 2.0kb upstream 6226 true chromosome_2: 1213581-1219806 Chlamydomonas reinhardtii
Cre02.g082200 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 1217807-1219806 Chlamydomonas reinhardtii
Cre02.g082200 2.0kb downstream 2.0kb downstream 6226 true chromosome_2: 1211581-1217806 Chlamydomonas reinhardtii
Cre02.g082200 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 1211581-1213580 Chlamydomonas reinhardtii
Cre02.g082200 5.0kb upstream 5.0kb upstream 9226 true chromosome_2: 1213581-1222806 Chlamydomonas reinhardtii
Cre02.g082200 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 1217807-1222806 Chlamydomonas reinhardtii
Cre02.g082200 5.0kb downstream 5.0kb downstream 9226 true chromosome_2: 1208581-1217806 Chlamydomonas reinhardtii
Cre02.g082200 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 1208581-1213580 Chlamydomonas reinhardtii
Cre02.g082200 10.0kb upstream 10.0kb upstream 14226 true chromosome_2: 1213581-1227806 Chlamydomonas reinhardtii
Cre02.g082200 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 1217807-1227806 Chlamydomonas reinhardtii
Cre02.g082200 10.0kb downstream 10.0kb downstream 14226 true chromosome_2: 1203581-1217806 Chlamydomonas reinhardtii
Cre02.g082200 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 1203581-1213580 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110502 5260 Chlorophyte View MSA
123424273 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.777        
cufflinks 1.475        
cufflinks 1.466        
cufflinks 1.903        
cufflinks 1.22       Low
cufflinks 1.671        
cufflinks 1.404       Low
cufflinks 2.393       High
cufflinks 1.492        
cufflinks 1.456        
cufflinks 1.399       Low
cufflinks 1.966        
cufflinks 1.501        
cufflinks 1.56        
cufflinks 1.664        
cufflinks 1.625        
cufflinks 1.979        
cufflinks 1.808        
cufflinks 1.595        
cufflinks 2.796       High
cufflinks 1.929        
cufflinks 1.977        
cufflinks 1.51        
cufflinks 1.911        
cufflinks 1.896        
cufflinks 2.37386 0.146987 4.60073   High
cufflinks 5.32026 0.718486 9.92204    
cufflinks 2.46314 0.0 5.71006    
cufflinks 4.29668 0.577583 8.01579   High
cufflinks 3.36025 0.186831 6.53368   Low

0 Strain