Gene : SWB1 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g118250 Defline:  (1 of 1) K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27)
Genomic Order:  1124 Name:  ? Cre02.g118250
Secondary Identifier:  ? PAC:30785507
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g118250 0.5kb upstream 0.5kb upstream 3356 true chromosome_2: 6728465-6731820 Chlamydomonas reinhardtii
Cre02.g118250 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 6728465-6728964 Chlamydomonas reinhardtii
Cre02.g118250 0.5kb downstream 0.5kb downstream 3356 true chromosome_2: 6728965-6732320 Chlamydomonas reinhardtii
Cre02.g118250 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 6731821-6732320 Chlamydomonas reinhardtii
Cre02.g118250 1.0kb upstream 1.0kb upstream 3856 true chromosome_2: 6727965-6731820 Chlamydomonas reinhardtii
Cre02.g118250 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 6727965-6728964 Chlamydomonas reinhardtii
Cre02.g118250 1.0kb downstream 1.0kb downstream 3856 true chromosome_2: 6728965-6732820 Chlamydomonas reinhardtii
Cre02.g118250 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 6731821-6732820 Chlamydomonas reinhardtii
Cre02.g118250 2.0kb upstream 2.0kb upstream 4856 true chromosome_2: 6726965-6731820 Chlamydomonas reinhardtii
Cre02.g118250 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 6726965-6728964 Chlamydomonas reinhardtii
Cre02.g118250 2.0kb downstream 2.0kb downstream 4856 true chromosome_2: 6728965-6733820 Chlamydomonas reinhardtii
Cre02.g118250 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 6731821-6733820 Chlamydomonas reinhardtii
Cre02.g118250 5.0kb upstream 5.0kb upstream 7856 true chromosome_2: 6723965-6731820 Chlamydomonas reinhardtii
Cre02.g118250 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 6723965-6728964 Chlamydomonas reinhardtii
Cre02.g118250 5.0kb downstream 5.0kb downstream 7856 true chromosome_2: 6728965-6736820 Chlamydomonas reinhardtii
Cre02.g118250 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 6731821-6736820 Chlamydomonas reinhardtii
Cre02.g118250 10.0kb upstream 10.0kb upstream 12856 true chromosome_2: 6718965-6731820 Chlamydomonas reinhardtii
Cre02.g118250 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 6718965-6728964 Chlamydomonas reinhardtii
Cre02.g118250 10.0kb downstream 10.0kb downstream 12856 true chromosome_2: 6728965-6741820 Chlamydomonas reinhardtii
Cre02.g118250 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 6731821-6741820 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112512 5260 Chlorophyte View MSA
123429029 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.918     High  
cufflinks 9.425        
cufflinks 16.394     High  
cufflinks 17.023     High  
cufflinks 16.869     High  
cufflinks 12.959     High  
cufflinks 12.264        
cufflinks 14.231     High  
cufflinks 14.885        
cufflinks 9.557        
cufflinks 7.243     High Low
cufflinks 14.534     High  
cufflinks 18.431     High High
cufflinks 9.086        
cufflinks 15.484     High  
cufflinks 13.935     High  
cufflinks 7.014       Low
cufflinks 14.089     High  
cufflinks 6.498     High Low
cufflinks 20.156     High High
cufflinks 12.094        
cufflinks 8.64       Low
cufflinks 18.375     High High
cufflinks 15.534     High  
cufflinks 7.998       Low
cufflinks 14.1917 1.27124 27.1121    
cufflinks 11.9287 3.25268 20.6047    
cufflinks 8.45211 0.0 16.9934    
cufflinks 7.66167 1.10812 14.2152   Low
cufflinks 11.2917 2.21314 20.3703    

0 Strain