Gene : Cre03.g145907 C. reinhardtii v5.6
Defline:  (1 of 1) 2.1.1.205 - tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase Genomic Order:  111
Name:  ? Cre03.g145907 Secondary Identifier:  ? PAC:30787606
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6829 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g145907 0.5kb upstream 0.5kb upstream 4297 true chromosome_3: 673878-678174 Chlamydomonas reinhardtii
Cre03.g145907 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 673878-674377 Chlamydomonas reinhardtii
Cre03.g145907 0.5kb downstream 0.5kb downstream 4297 true chromosome_3: 674378-678674 Chlamydomonas reinhardtii
Cre03.g145907 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 678175-678674 Chlamydomonas reinhardtii
Cre03.g145907 1.0kb upstream 1.0kb upstream 4797 true chromosome_3: 673378-678174 Chlamydomonas reinhardtii
Cre03.g145907 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 673378-674377 Chlamydomonas reinhardtii
Cre03.g145907 1.0kb downstream 1.0kb downstream 4797 true chromosome_3: 674378-679174 Chlamydomonas reinhardtii
Cre03.g145907 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 678175-679174 Chlamydomonas reinhardtii
Cre03.g145907 2.0kb upstream 2.0kb upstream 5797 true chromosome_3: 672378-678174 Chlamydomonas reinhardtii
Cre03.g145907 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 672378-674377 Chlamydomonas reinhardtii
Cre03.g145907 2.0kb downstream 2.0kb downstream 5797 true chromosome_3: 674378-680174 Chlamydomonas reinhardtii
Cre03.g145907 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 678175-680174 Chlamydomonas reinhardtii
Cre03.g145907 5.0kb upstream 5.0kb upstream 8797 true chromosome_3: 669378-678174 Chlamydomonas reinhardtii
Cre03.g145907 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 669378-674377 Chlamydomonas reinhardtii
Cre03.g145907 5.0kb downstream 5.0kb downstream 8797 true chromosome_3: 674378-683174 Chlamydomonas reinhardtii
Cre03.g145907 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 678175-683174 Chlamydomonas reinhardtii
Cre03.g145907 10.0kb upstream 10.0kb upstream 13797 true chromosome_3: 664378-678174 Chlamydomonas reinhardtii
Cre03.g145907 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 664378-674377 Chlamydomonas reinhardtii
Cre03.g145907 10.0kb downstream 10.0kb downstream 13797 true chromosome_3: 674378-688174 Chlamydomonas reinhardtii
Cre03.g145907 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 678175-688174 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109263 5260 Chlorophyte View MSA
123424894 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.753        
cufflinks 2.607       High
cufflinks 1.043       Low
cufflinks 1.378        
cufflinks 2.338        
cufflinks 2.148        
cufflinks 2.107        
cufflinks 2.173        
cufflinks 1.907        
cufflinks 0.823       Low
cufflinks 1.245        
cufflinks 2.2        
cufflinks 1.081       Low
cufflinks 1.949        
cufflinks 1.74        
cufflinks 2.526       High
cufflinks 0.778       Low
cufflinks 1.381        
cufflinks 0.884       Low
cufflinks 2.306        
cufflinks 1.888        
cufflinks 1.618        
cufflinks 1.744        
cufflinks 2.144        
cufflinks 1.617        
cufflinks 6.98665 1.16749 12.8058   High
cufflinks 9.80784 2.52808 17.0876    
cufflinks 1.71536 0.0 4.18538    
cufflinks 4.50095 0.60431 8.3976   Low
cufflinks 6.74051 1.18227 12.2987   High

0 Strain