Gene : Cre03.g145747 C. reinhardtii v5.6
Defline:  (1 of 1) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  103
Name:  ? Cre03.g145747 Secondary Identifier:  ? PAC:30787154
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii ARO-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-6163 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g145747 0.5kb upstream 0.5kb upstream 4656 true chromosome_3: 628582-633237 Chlamydomonas reinhardtii
Cre03.g145747 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 632738-633237 Chlamydomonas reinhardtii
Cre03.g145747 0.5kb downstream 0.5kb downstream 4656 true chromosome_3: 628082-632737 Chlamydomonas reinhardtii
Cre03.g145747 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 628082-628581 Chlamydomonas reinhardtii
Cre03.g145747 1.0kb upstream 1.0kb upstream 5156 true chromosome_3: 628582-633737 Chlamydomonas reinhardtii
Cre03.g145747 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 632738-633737 Chlamydomonas reinhardtii
Cre03.g145747 1.0kb downstream 1.0kb downstream 5156 true chromosome_3: 627582-632737 Chlamydomonas reinhardtii
Cre03.g145747 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 627582-628581 Chlamydomonas reinhardtii
Cre03.g145747 2.0kb upstream 2.0kb upstream 6156 true chromosome_3: 628582-634737 Chlamydomonas reinhardtii
Cre03.g145747 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 632738-634737 Chlamydomonas reinhardtii
Cre03.g145747 2.0kb downstream 2.0kb downstream 6156 true chromosome_3: 626582-632737 Chlamydomonas reinhardtii
Cre03.g145747 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 626582-628581 Chlamydomonas reinhardtii
Cre03.g145747 5.0kb upstream 5.0kb upstream 9156 true chromosome_3: 628582-637737 Chlamydomonas reinhardtii
Cre03.g145747 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 632738-637737 Chlamydomonas reinhardtii
Cre03.g145747 5.0kb downstream 5.0kb downstream 9156 true chromosome_3: 623582-632737 Chlamydomonas reinhardtii
Cre03.g145747 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 623582-628581 Chlamydomonas reinhardtii
Cre03.g145747 10.0kb upstream 10.0kb upstream 14156 true chromosome_3: 628582-642737 Chlamydomonas reinhardtii
Cre03.g145747 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 632738-642737 Chlamydomonas reinhardtii
Cre03.g145747 10.0kb downstream 10.0kb downstream 14156 true chromosome_3: 618582-632737 Chlamydomonas reinhardtii
Cre03.g145747 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 618582-628581 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110609 5260 Chlorophyte View MSA
123428194 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.037     High High
cufflinks 28.864     High  
cufflinks 16.879     High  
cufflinks 20.877     High  
cufflinks 31.352     High  
cufflinks 29.902     High  
cufflinks 15.676     High  
cufflinks 24.422     High  
cufflinks 37.562     High High
cufflinks 12.281     High Low
cufflinks 21.792     High  
cufflinks 26.635     High  
cufflinks 17.135     High  
cufflinks 29.12     High  
cufflinks 21.216     High  
cufflinks 55.012     High High
cufflinks 23.673     High  
cufflinks 20.217     High  
cufflinks 6.097     High Low
cufflinks 12.152       Low
cufflinks 23.862     High  
cufflinks 24.39     High  
cufflinks 12.883     High Low
cufflinks 24.833     High  
cufflinks 24.863     High  
cufflinks 49.3562 0.0 99.4836 High Low
cufflinks 83.8784 16.1189 151.638 High High
cufflinks 2.79028 0.0 6.17492   Low
cufflinks 25.8537 1.24623 50.4612 High Low
cufflinks 33.4167 4.71525 62.1182 High  

0 Strain