Gene : Cre03.g148750 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR33428//PTHR33428:SF2 - FAMILY NOT NAMED // CHLOROPHYLLASE-1 Genomic Order:  173
Name:  ? Cre03.g148750 Secondary Identifier:  ? PAC:30786751
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6927 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g148750 0.5kb upstream 0.5kb upstream 3990 true chromosome_3: 1094326-1098315 Chlamydomonas reinhardtii
Cre03.g148750 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 1097816-1098315 Chlamydomonas reinhardtii
Cre03.g148750 0.5kb downstream 0.5kb downstream 3990 true chromosome_3: 1093826-1097815 Chlamydomonas reinhardtii
Cre03.g148750 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 1093826-1094325 Chlamydomonas reinhardtii
Cre03.g148750 1.0kb upstream 1.0kb upstream 4490 true chromosome_3: 1094326-1098815 Chlamydomonas reinhardtii
Cre03.g148750 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 1097816-1098815 Chlamydomonas reinhardtii
Cre03.g148750 1.0kb downstream 1.0kb downstream 4490 true chromosome_3: 1093326-1097815 Chlamydomonas reinhardtii
Cre03.g148750 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 1093326-1094325 Chlamydomonas reinhardtii
Cre03.g148750 2.0kb upstream 2.0kb upstream 5490 true chromosome_3: 1094326-1099815 Chlamydomonas reinhardtii
Cre03.g148750 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 1097816-1099815 Chlamydomonas reinhardtii
Cre03.g148750 2.0kb downstream 2.0kb downstream 5490 true chromosome_3: 1092326-1097815 Chlamydomonas reinhardtii
Cre03.g148750 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 1092326-1094325 Chlamydomonas reinhardtii
Cre03.g148750 5.0kb upstream 5.0kb upstream 8490 true chromosome_3: 1094326-1102815 Chlamydomonas reinhardtii
Cre03.g148750 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 1097816-1102815 Chlamydomonas reinhardtii
Cre03.g148750 5.0kb downstream 5.0kb downstream 8490 true chromosome_3: 1089326-1097815 Chlamydomonas reinhardtii
Cre03.g148750 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 1089326-1094325 Chlamydomonas reinhardtii
Cre03.g148750 10.0kb upstream 10.0kb upstream 13490 true chromosome_3: 1094326-1107815 Chlamydomonas reinhardtii
Cre03.g148750 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 1097816-1107815 Chlamydomonas reinhardtii
Cre03.g148750 10.0kb downstream 10.0kb downstream 13490 true chromosome_3: 1084326-1097815 Chlamydomonas reinhardtii
Cre03.g148750 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 1084326-1094325 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111024 5260 Chlorophyte View MSA
123428003 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.145       Low
cufflinks 1.361        
cufflinks 1.284        
cufflinks 1.233        
cufflinks 1.081        
cufflinks 1.293        
cufflinks 1.588        
cufflinks 1.213        
cufflinks 0.206       Low
cufflinks 1.18        
cufflinks 1.1        
cufflinks 1.651        
cufflinks 1.834        
cufflinks 1.387        
cufflinks 1.207        
cufflinks 0.374       Low
cufflinks 1.028        
cufflinks 1.239        
cufflinks 0.447       Low
cufflinks 1.142        
cufflinks 1.143        
cufflinks 0.924        
cufflinks 2.317       High
cufflinks 1.623        
cufflinks 0.893        
cufflinks 2.45084 0.0794951 4.82219    
cufflinks 2.84171 0.0 5.94398    
cufflinks 14.9558 0.0 30.1459   High
cufflinks 3.01782 0.202355 5.83329    
cufflinks 4.64588 0.401035 8.89072    

0 Strain