Gene : PLSB1 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g143000 Defline:  (1 of 1) K00630 - glycerol-3-phosphate O-acyltransferase (ATS1)
Genomic Order:  1296 Name:  ? Cre02.g143000
Secondary Identifier:  ? PAC:30785697
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY0-1319 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY4FS-7 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY4FS-8 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5667 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7411 Chlamydomonas reinhardtii pathologic  
Creinhardtii TRIGLSYN-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g143000 0.5kb upstream 0.5kb upstream 3582 true chromosome_2: 7698863-7702444 Chlamydomonas reinhardtii
Cre02.g143000 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 7698863-7699362 Chlamydomonas reinhardtii
Cre02.g143000 0.5kb downstream 0.5kb downstream 3582 true chromosome_2: 7699363-7702944 Chlamydomonas reinhardtii
Cre02.g143000 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 7702445-7702944 Chlamydomonas reinhardtii
Cre02.g143000 1.0kb upstream 1.0kb upstream 4082 true chromosome_2: 7698363-7702444 Chlamydomonas reinhardtii
Cre02.g143000 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 7698363-7699362 Chlamydomonas reinhardtii
Cre02.g143000 1.0kb downstream 1.0kb downstream 4082 true chromosome_2: 7699363-7703444 Chlamydomonas reinhardtii
Cre02.g143000 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 7702445-7703444 Chlamydomonas reinhardtii
Cre02.g143000 2.0kb upstream 2.0kb upstream 5082 true chromosome_2: 7697363-7702444 Chlamydomonas reinhardtii
Cre02.g143000 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 7697363-7699362 Chlamydomonas reinhardtii
Cre02.g143000 2.0kb downstream 2.0kb downstream 5082 true chromosome_2: 7699363-7704444 Chlamydomonas reinhardtii
Cre02.g143000 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 7702445-7704444 Chlamydomonas reinhardtii
Cre02.g143000 5.0kb upstream 5.0kb upstream 8082 true chromosome_2: 7694363-7702444 Chlamydomonas reinhardtii
Cre02.g143000 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 7694363-7699362 Chlamydomonas reinhardtii
Cre02.g143000 5.0kb downstream 5.0kb downstream 8082 true chromosome_2: 7699363-7707444 Chlamydomonas reinhardtii
Cre02.g143000 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 7702445-7707444 Chlamydomonas reinhardtii
Cre02.g143000 10.0kb upstream 10.0kb upstream 13082 true chromosome_2: 7689363-7702444 Chlamydomonas reinhardtii
Cre02.g143000 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 7689363-7699362 Chlamydomonas reinhardtii
Cre02.g143000 10.0kb downstream 10.0kb downstream 13082 true chromosome_2: 7699363-7712444 Chlamydomonas reinhardtii
Cre02.g143000 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 7702445-7712444 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110360 5260 Chlorophyte View MSA
123424445 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.062     High  
cufflinks 35.366     High  
cufflinks 22.57     High  
cufflinks 33.743     High  
cufflinks 38.504     High  
cufflinks 36.904     High  
cufflinks 15.085     High Low
cufflinks 38.763     High  
cufflinks 58.331     High High
cufflinks 22.44     High  
cufflinks 29.138     High  
cufflinks 33.195     High  
cufflinks 20.973     High  
cufflinks 37.874     High  
cufflinks 27.072     High  
cufflinks 56.826     High High
cufflinks 66.383     High High
cufflinks 32.748     High  
cufflinks 7.897     High Low
cufflinks 17.821     High Low
cufflinks 32.967     High  
cufflinks 56.574     High High
cufflinks 19.458     High Low
cufflinks 47.167     High  
cufflinks 70.885     High High
cufflinks 57.1095 0.0 116.144 High High
cufflinks 62.4455 12.9867 111.904 High  
cufflinks 20.5706 0.0 41.524    
cufflinks 23.5552 1.02795 46.0825 High Low
cufflinks 51.0469 4.78157 97.3122 High  

0 Strain