Gene : Cre03.g184500 C. reinhardtii v5.6

Defline:  (1 of 2) PTHR33925//PTHR33925:SF3 - FAMILY NOT NAMED // PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC Genomic Order:  951
Name:  ? Cre03.g184500 Secondary Identifier:  ? PAC:30788234

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g184500 0.5kb upstream 0.5kb upstream 5626 true chromosome_3: 5373735-5379360 Chlamydomonas reinhardtii
Cre03.g184500 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 5378861-5379360 Chlamydomonas reinhardtii
Cre03.g184500 0.5kb downstream 0.5kb downstream 5626 true chromosome_3: 5373235-5378860 Chlamydomonas reinhardtii
Cre03.g184500 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 5373235-5373734 Chlamydomonas reinhardtii
Cre03.g184500 1.0kb upstream 1.0kb upstream 6126 true chromosome_3: 5373735-5379860 Chlamydomonas reinhardtii
Cre03.g184500 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 5378861-5379860 Chlamydomonas reinhardtii
Cre03.g184500 1.0kb downstream 1.0kb downstream 6126 true chromosome_3: 5372735-5378860 Chlamydomonas reinhardtii
Cre03.g184500 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 5372735-5373734 Chlamydomonas reinhardtii
Cre03.g184500 2.0kb upstream 2.0kb upstream 7126 true chromosome_3: 5373735-5380860 Chlamydomonas reinhardtii
Cre03.g184500 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 5378861-5380860 Chlamydomonas reinhardtii
Cre03.g184500 2.0kb downstream 2.0kb downstream 7126 true chromosome_3: 5371735-5378860 Chlamydomonas reinhardtii
Cre03.g184500 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 5371735-5373734 Chlamydomonas reinhardtii
Cre03.g184500 5.0kb upstream 5.0kb upstream 10126 true chromosome_3: 5373735-5383860 Chlamydomonas reinhardtii
Cre03.g184500 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 5378861-5383860 Chlamydomonas reinhardtii
Cre03.g184500 5.0kb downstream 5.0kb downstream 10126 true chromosome_3: 5368735-5378860 Chlamydomonas reinhardtii
Cre03.g184500 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 5368735-5373734 Chlamydomonas reinhardtii
Cre03.g184500 10.0kb upstream 10.0kb upstream 15126 true chromosome_3: 5373735-5388860 Chlamydomonas reinhardtii
Cre03.g184500 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 5378861-5388860 Chlamydomonas reinhardtii
Cre03.g184500 10.0kb downstream 10.0kb downstream 15126 true chromosome_3: 5363735-5378860 Chlamydomonas reinhardtii
Cre03.g184500 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 5363735-5373734 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112223 5260 Chlorophyte View MSA
123426631 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.072     Low Low
cufflinks 8.642        
cufflinks 16.362     High High
cufflinks 8.18        
cufflinks 3.753        
cufflinks 7.078        
cufflinks 7.296        
cufflinks 12.687        
cufflinks 0.068     Low Low
cufflinks 0.499        
cufflinks 6.064        
cufflinks 6.191        
cufflinks 5.903        
cufflinks 5.206        
cufflinks 5.295        
cufflinks 0.102     Low Low
cufflinks 0.044     Low Low
cufflinks 5.891        
cufflinks 0.032     Low Low
cufflinks 0.342        
cufflinks 2.156        
cufflinks 0.021     Low Low
cufflinks 17.654     High High
cufflinks 5.874        
cufflinks 0.057     Low Low
cufflinks 3.36754 0.566594 6.16849   Low
cufflinks 2.879 0.458372 5.29963   Low
cufflinks 11.1319 0.0 22.4034    
cufflinks 8.08112 0.933478 15.2288    
cufflinks 6.05327 1.20911 10.8974    

0 Strain