Gene : CPLD28 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g184550 Defline:  (1 of 1) PTHR34051:SF2 - PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC
Genomic Order:  952 Name:  ? Cre03.g184550
Secondary Identifier:  ? PAC:30787690
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g184550 0.5kb upstream 0.5kb upstream 3031 true chromosome_3: 5378910-5381940 Chlamydomonas reinhardtii
Cre03.g184550 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 5381441-5381940 Chlamydomonas reinhardtii
Cre03.g184550 0.5kb downstream 0.5kb downstream 3031 true chromosome_3: 5378410-5381440 Chlamydomonas reinhardtii
Cre03.g184550 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 5378410-5378909 Chlamydomonas reinhardtii
Cre03.g184550 1.0kb upstream 1.0kb upstream 3531 true chromosome_3: 5378910-5382440 Chlamydomonas reinhardtii
Cre03.g184550 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 5381441-5382440 Chlamydomonas reinhardtii
Cre03.g184550 1.0kb downstream 1.0kb downstream 3531 true chromosome_3: 5377910-5381440 Chlamydomonas reinhardtii
Cre03.g184550 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 5377910-5378909 Chlamydomonas reinhardtii
Cre03.g184550 2.0kb upstream 2.0kb upstream 4531 true chromosome_3: 5378910-5383440 Chlamydomonas reinhardtii
Cre03.g184550 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 5381441-5383440 Chlamydomonas reinhardtii
Cre03.g184550 2.0kb downstream 2.0kb downstream 4531 true chromosome_3: 5376910-5381440 Chlamydomonas reinhardtii
Cre03.g184550 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 5376910-5378909 Chlamydomonas reinhardtii
Cre03.g184550 5.0kb upstream 5.0kb upstream 7531 true chromosome_3: 5378910-5386440 Chlamydomonas reinhardtii
Cre03.g184550 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 5381441-5386440 Chlamydomonas reinhardtii
Cre03.g184550 5.0kb downstream 5.0kb downstream 7531 true chromosome_3: 5373910-5381440 Chlamydomonas reinhardtii
Cre03.g184550 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 5373910-5378909 Chlamydomonas reinhardtii
Cre03.g184550 10.0kb upstream 10.0kb upstream 12531 true chromosome_3: 5378910-5391440 Chlamydomonas reinhardtii
Cre03.g184550 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 5381441-5391440 Chlamydomonas reinhardtii
Cre03.g184550 10.0kb downstream 10.0kb downstream 12531 true chromosome_3: 5368910-5381440 Chlamydomonas reinhardtii
Cre03.g184550 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 5368910-5378909 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110528 5260 Chlorophyte View MSA
123428835 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.859     High High
cufflinks 23.15     High  
cufflinks 17.829     High  
cufflinks 17.967     High  
cufflinks 27.328     High  
cufflinks 26.064     High  
cufflinks 7.73       Low
cufflinks 18.011     High  
cufflinks 38.949     High High
cufflinks 11.207     High  
cufflinks 14.608     High  
cufflinks 21.246     High  
cufflinks 21.057     High  
cufflinks 25.441     High  
cufflinks 16.134     High  
cufflinks 44.112     High High
cufflinks 41.683     High High
cufflinks 20.538     High  
cufflinks 2.722       Low
cufflinks 11.127        
cufflinks 17.902     High  
cufflinks 39.395     High High
cufflinks 7.619       Low
cufflinks 21.59     High  
cufflinks 44.475     High High
cufflinks 45.1997 1.87835 88.521 High  
cufflinks 59.6536 15.4993 103.808 High High
cufflinks 35.0042 0.0 70.4962 High  
cufflinks 26.6179 2.56896 50.6669 High  
cufflinks 29.5075 5.50869 53.5063 High  

0 Strain