Gene : EGY1 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g206929 Defline:  (1 of 1) PTHR31412//PTHR31412:SF0 - FAMILY NOT NAMED // ZINC METALLOPROTEASE EGY1, CHLOROPLASTIC-RELATED
Genomic Order:  1541 Name:  ? Cre03.g206929
Secondary Identifier:  ? PAC:30788225
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g206929 0.5kb upstream 0.5kb upstream 4701 true chromosome_3: 8851924-8856624 Chlamydomonas reinhardtii
Cre03.g206929 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 8856125-8856624 Chlamydomonas reinhardtii
Cre03.g206929 0.5kb downstream 0.5kb downstream 4701 true chromosome_3: 8851424-8856124 Chlamydomonas reinhardtii
Cre03.g206929 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 8851424-8851923 Chlamydomonas reinhardtii
Cre03.g206929 1.0kb upstream 1.0kb upstream 5201 true chromosome_3: 8851924-8857124 Chlamydomonas reinhardtii
Cre03.g206929 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 8856125-8857124 Chlamydomonas reinhardtii
Cre03.g206929 1.0kb downstream 1.0kb downstream 5201 true chromosome_3: 8850924-8856124 Chlamydomonas reinhardtii
Cre03.g206929 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 8850924-8851923 Chlamydomonas reinhardtii
Cre03.g206929 2.0kb upstream 2.0kb upstream 6201 true chromosome_3: 8851924-8858124 Chlamydomonas reinhardtii
Cre03.g206929 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 8856125-8858124 Chlamydomonas reinhardtii
Cre03.g206929 2.0kb downstream 2.0kb downstream 6201 true chromosome_3: 8849924-8856124 Chlamydomonas reinhardtii
Cre03.g206929 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 8849924-8851923 Chlamydomonas reinhardtii
Cre03.g206929 5.0kb upstream 5.0kb upstream 9201 true chromosome_3: 8851924-8861124 Chlamydomonas reinhardtii
Cre03.g206929 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 8856125-8861124 Chlamydomonas reinhardtii
Cre03.g206929 5.0kb downstream 5.0kb downstream 9201 true chromosome_3: 8846924-8856124 Chlamydomonas reinhardtii
Cre03.g206929 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 8846924-8851923 Chlamydomonas reinhardtii
Cre03.g206929 10.0kb upstream 10.0kb upstream 14201 true chromosome_3: 8851924-8866124 Chlamydomonas reinhardtii
Cre03.g206929 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 8856125-8866124 Chlamydomonas reinhardtii
Cre03.g206929 10.0kb downstream 10.0kb downstream 14201 true chromosome_3: 8841924-8856124 Chlamydomonas reinhardtii
Cre03.g206929 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 8841924-8851923 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111281 5260 Chlorophyte View MSA
123425233 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.672     High  
cufflinks 14.137        
cufflinks 13.773        
cufflinks 12.462        
cufflinks 14.582     High  
cufflinks 19.391     High  
cufflinks 10.573        
cufflinks 15.199        
cufflinks 14.699     High  
cufflinks 11.918     High  
cufflinks 10.471        
cufflinks 18.029     High  
cufflinks 22.598     High High
cufflinks 21.55     High  
cufflinks 9.487       Low
cufflinks 22.861     High High
cufflinks 18.377     High  
cufflinks 15.721     High  
cufflinks 3.161       Low
cufflinks 23.402     High High
cufflinks 12.834     High  
cufflinks 15.247     High  
cufflinks 24.938     High High
cufflinks 17.112     High  
cufflinks 19.1     High  
cufflinks 52.9712 0.0 107.802 High Low
cufflinks 25.1601 6.6613 43.6588    
cufflinks 20.0872 0.0 40.5758    
cufflinks 16.6281 1.19209 32.0641    
cufflinks 23.9211 3.4859 44.3563    

0 Strain