Gene : SNF1 C. reinhardtii v5.6
Primary Identifier:  ? Cre04.g211600 Defline:  (1 of 1) PTHR24343//PTHR24343:SF183 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED
Genomic Order:  238 Name:  ? Cre04.g211600
Secondary Identifier:  ? PAC:30791133
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g211600 0.5kb upstream 0.5kb upstream 13096 true chromosome_4: 1840584-1853679 Chlamydomonas reinhardtii
Cre04.g211600 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 1853180-1853679 Chlamydomonas reinhardtii
Cre04.g211600 0.5kb downstream 0.5kb downstream 13096 true chromosome_4: 1840084-1853179 Chlamydomonas reinhardtii
Cre04.g211600 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 1840084-1840583 Chlamydomonas reinhardtii
Cre04.g211600 1.0kb upstream 1.0kb upstream 13596 true chromosome_4: 1840584-1854179 Chlamydomonas reinhardtii
Cre04.g211600 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 1853180-1854179 Chlamydomonas reinhardtii
Cre04.g211600 1.0kb downstream 1.0kb downstream 13596 true chromosome_4: 1839584-1853179 Chlamydomonas reinhardtii
Cre04.g211600 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 1839584-1840583 Chlamydomonas reinhardtii
Cre04.g211600 2.0kb upstream 2.0kb upstream 14596 true chromosome_4: 1840584-1855179 Chlamydomonas reinhardtii
Cre04.g211600 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 1853180-1855179 Chlamydomonas reinhardtii
Cre04.g211600 2.0kb downstream 2.0kb downstream 14596 true chromosome_4: 1838584-1853179 Chlamydomonas reinhardtii
Cre04.g211600 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 1838584-1840583 Chlamydomonas reinhardtii
Cre04.g211600 5.0kb upstream 5.0kb upstream 17596 true chromosome_4: 1840584-1858179 Chlamydomonas reinhardtii
Cre04.g211600 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 1853180-1858179 Chlamydomonas reinhardtii
Cre04.g211600 5.0kb downstream 5.0kb downstream 17596 true chromosome_4: 1835584-1853179 Chlamydomonas reinhardtii
Cre04.g211600 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 1835584-1840583 Chlamydomonas reinhardtii
Cre04.g211600 10.0kb upstream 10.0kb upstream 22596 true chromosome_4: 1840584-1863179 Chlamydomonas reinhardtii
Cre04.g211600 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 1853180-1863179 Chlamydomonas reinhardtii
Cre04.g211600 10.0kb downstream 10.0kb downstream 22596 true chromosome_4: 1830584-1853179 Chlamydomonas reinhardtii
Cre04.g211600 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 1830584-1840583 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109274 5260 Chlorophyte View MSA
123423955 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.054        
cufflinks 3.045        
cufflinks 6.481        
cufflinks 7.467       High
cufflinks 2.676        
cufflinks 2.456        
cufflinks 2.546        
cufflinks 4.811        
cufflinks 3.362        
cufflinks 1.065       Low
cufflinks 8.169       High
cufflinks 5.422        
cufflinks 1.793       Low
cufflinks 2.929        
cufflinks 4.394        
cufflinks 3.994        
cufflinks 7.097       High
cufflinks 4.499        
cufflinks 1.083       Low
cufflinks 5.982        
cufflinks 5.034        
cufflinks 5.919        
cufflinks 2.829        
cufflinks 5.768        
cufflinks 5.732        
cufflinks 1.24186 0.137693 2.34602   Low
cufflinks 11.135 2.83538 19.4347    
cufflinks 6.00122 0.0 12.0611    
cufflinks 7.24188 0.667646 13.8161   High
cufflinks 8.4721 1.4568 15.4874   Low

0 Strain