Gene : RPH2 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g188200 Defline:  (1 of 1) PTHR11097:SF8 - EXOSOME COMPLEX COMPONENT RRP42
Genomic Order:  1025 Name:  ? Cre03.g188200
Secondary Identifier:  ? PAC:30786998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g188200 0.5kb upstream 0.5kb upstream 4715 true chromosome_3: 5736981-5741695 Chlamydomonas reinhardtii
Cre03.g188200 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 5736981-5737480 Chlamydomonas reinhardtii
Cre03.g188200 0.5kb downstream 0.5kb downstream 4715 true chromosome_3: 5737481-5742195 Chlamydomonas reinhardtii
Cre03.g188200 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 5741696-5742195 Chlamydomonas reinhardtii
Cre03.g188200 1.0kb upstream 1.0kb upstream 5215 true chromosome_3: 5736481-5741695 Chlamydomonas reinhardtii
Cre03.g188200 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 5736481-5737480 Chlamydomonas reinhardtii
Cre03.g188200 1.0kb downstream 1.0kb downstream 5215 true chromosome_3: 5737481-5742695 Chlamydomonas reinhardtii
Cre03.g188200 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 5741696-5742695 Chlamydomonas reinhardtii
Cre03.g188200 2.0kb upstream 2.0kb upstream 6215 true chromosome_3: 5735481-5741695 Chlamydomonas reinhardtii
Cre03.g188200 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 5735481-5737480 Chlamydomonas reinhardtii
Cre03.g188200 2.0kb downstream 2.0kb downstream 6215 true chromosome_3: 5737481-5743695 Chlamydomonas reinhardtii
Cre03.g188200 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 5741696-5743695 Chlamydomonas reinhardtii
Cre03.g188200 5.0kb upstream 5.0kb upstream 9215 true chromosome_3: 5732481-5741695 Chlamydomonas reinhardtii
Cre03.g188200 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 5732481-5737480 Chlamydomonas reinhardtii
Cre03.g188200 5.0kb downstream 5.0kb downstream 9215 true chromosome_3: 5737481-5746695 Chlamydomonas reinhardtii
Cre03.g188200 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 5741696-5746695 Chlamydomonas reinhardtii
Cre03.g188200 10.0kb upstream 10.0kb upstream 14215 true chromosome_3: 5727481-5741695 Chlamydomonas reinhardtii
Cre03.g188200 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 5727481-5737480 Chlamydomonas reinhardtii
Cre03.g188200 10.0kb downstream 10.0kb downstream 14215 true chromosome_3: 5737481-5751695 Chlamydomonas reinhardtii
Cre03.g188200 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 5741696-5751695 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113478 5260 Chlorophyte View MSA
123428075 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.744        
cufflinks 3.241       High
cufflinks 1.204        
cufflinks 1.449        
cufflinks 1.991        
cufflinks 2.501        
cufflinks 2.932       High
cufflinks 2.174        
cufflinks 2.538        
cufflinks 1.2        
cufflinks 1.143        
cufflinks 2.132        
cufflinks 1.532        
cufflinks 2.092        
cufflinks 1.795        
cufflinks 3.157       High
cufflinks 0.596       Low
cufflinks 1.326        
cufflinks 2.409        
cufflinks 1.38        
cufflinks 2.133        
cufflinks 0.775       Low
cufflinks 1.884        
cufflinks 2.01        
cufflinks 0.565       Low
cufflinks 17.6439 2.45399 32.8337   High
cufflinks 15.4328 3.72775 27.1379   High
cufflinks 1.00882 0.0 2.80856    
cufflinks 6.26961 0.885661 11.6536    
cufflinks 7.83203 1.10251 14.5616    

0 Strain