Gene : Cre03.g194300 C. reinhardtii v5.6
Defline:  (1 of 1) K18163 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6 (NDUFAF6) Genomic Order:  1146
Name:  ? Cre03.g194300 Secondary Identifier:  ? PAC:30786537
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii CAROTENOID-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-6287 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-6475 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g194300 0.5kb upstream 0.5kb upstream 4146 true chromosome_3: 6403539-6407684 Chlamydomonas reinhardtii
Cre03.g194300 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 6407185-6407684 Chlamydomonas reinhardtii
Cre03.g194300 0.5kb downstream 0.5kb downstream 4146 true chromosome_3: 6403039-6407184 Chlamydomonas reinhardtii
Cre03.g194300 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 6403039-6403538 Chlamydomonas reinhardtii
Cre03.g194300 1.0kb upstream 1.0kb upstream 4646 true chromosome_3: 6403539-6408184 Chlamydomonas reinhardtii
Cre03.g194300 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 6407185-6408184 Chlamydomonas reinhardtii
Cre03.g194300 1.0kb downstream 1.0kb downstream 4646 true chromosome_3: 6402539-6407184 Chlamydomonas reinhardtii
Cre03.g194300 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 6402539-6403538 Chlamydomonas reinhardtii
Cre03.g194300 2.0kb upstream 2.0kb upstream 5646 true chromosome_3: 6403539-6409184 Chlamydomonas reinhardtii
Cre03.g194300 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 6407185-6409184 Chlamydomonas reinhardtii
Cre03.g194300 2.0kb downstream 2.0kb downstream 5646 true chromosome_3: 6401539-6407184 Chlamydomonas reinhardtii
Cre03.g194300 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 6401539-6403538 Chlamydomonas reinhardtii
Cre03.g194300 5.0kb upstream 5.0kb upstream 8646 true chromosome_3: 6403539-6412184 Chlamydomonas reinhardtii
Cre03.g194300 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 6407185-6412184 Chlamydomonas reinhardtii
Cre03.g194300 5.0kb downstream 5.0kb downstream 8646 true chromosome_3: 6398539-6407184 Chlamydomonas reinhardtii
Cre03.g194300 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 6398539-6403538 Chlamydomonas reinhardtii
Cre03.g194300 10.0kb upstream 10.0kb upstream 13646 true chromosome_3: 6403539-6417184 Chlamydomonas reinhardtii
Cre03.g194300 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 6407185-6417184 Chlamydomonas reinhardtii
Cre03.g194300 10.0kb downstream 10.0kb downstream 13646 true chromosome_3: 6393539-6407184 Chlamydomonas reinhardtii
Cre03.g194300 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 6393539-6403538 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110708 5260 Chlorophyte View MSA
123424120 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.801        
cufflinks 1.191       High
cufflinks 0.565        
cufflinks 0.666        
cufflinks 1.016        
cufflinks 0.941        
cufflinks 1.232       High
cufflinks 0.919        
cufflinks 1.448       High
cufflinks 0.539        
cufflinks 0.325       Low
cufflinks 0.803        
cufflinks 0.681        
cufflinks 1.122        
cufflinks 0.685        
cufflinks 1.0        
cufflinks 0.472        
cufflinks 0.932        
cufflinks 0.205       Low
cufflinks 0.246       Low
cufflinks 0.682        
cufflinks 0.471        
cufflinks 0.997        
cufflinks 0.75        
cufflinks 0.662        
cufflinks 7.27523 1.22277 13.3277   Low
cufflinks 2.94612 0.0978699 5.79438    
cufflinks 2.88235 0.0 6.39246    
cufflinks 2.11263 0.137844 4.08742   Low
cufflinks 4.26484 0.560519 7.96915   High

0 Strain