Gene : CCR4 C. reinhardtii v5.6
Primary Identifier:  ? Cre04.g227350 Defline:  (1 of 1) K12580 - CCR4-NOT transcription complex subunit 3 (CNOT3, NOT3)
Genomic Order:  457 Name:  ? Cre04.g227350
Secondary Identifier:  ? PAC:30791049
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g227350 0.5kb upstream 0.5kb upstream 7722 true chromosome_4: 3347199-3354920 Chlamydomonas reinhardtii
Cre04.g227350 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 3347199-3347698 Chlamydomonas reinhardtii
Cre04.g227350 0.5kb downstream 0.5kb downstream 7722 true chromosome_4: 3347699-3355420 Chlamydomonas reinhardtii
Cre04.g227350 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 3354921-3355420 Chlamydomonas reinhardtii
Cre04.g227350 1.0kb upstream 1.0kb upstream 8222 true chromosome_4: 3346699-3354920 Chlamydomonas reinhardtii
Cre04.g227350 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 3346699-3347698 Chlamydomonas reinhardtii
Cre04.g227350 1.0kb downstream 1.0kb downstream 8222 true chromosome_4: 3347699-3355920 Chlamydomonas reinhardtii
Cre04.g227350 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 3354921-3355920 Chlamydomonas reinhardtii
Cre04.g227350 2.0kb upstream 2.0kb upstream 9222 true chromosome_4: 3345699-3354920 Chlamydomonas reinhardtii
Cre04.g227350 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 3345699-3347698 Chlamydomonas reinhardtii
Cre04.g227350 2.0kb downstream 2.0kb downstream 9222 true chromosome_4: 3347699-3356920 Chlamydomonas reinhardtii
Cre04.g227350 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 3354921-3356920 Chlamydomonas reinhardtii
Cre04.g227350 5.0kb upstream 5.0kb upstream 12222 true chromosome_4: 3342699-3354920 Chlamydomonas reinhardtii
Cre04.g227350 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 3342699-3347698 Chlamydomonas reinhardtii
Cre04.g227350 5.0kb downstream 5.0kb downstream 12222 true chromosome_4: 3347699-3359920 Chlamydomonas reinhardtii
Cre04.g227350 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 3354921-3359920 Chlamydomonas reinhardtii
Cre04.g227350 10.0kb upstream 10.0kb upstream 17222 true chromosome_4: 3337699-3354920 Chlamydomonas reinhardtii
Cre04.g227350 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 3337699-3347698 Chlamydomonas reinhardtii
Cre04.g227350 10.0kb downstream 10.0kb downstream 17222 true chromosome_4: 3347699-3364920 Chlamydomonas reinhardtii
Cre04.g227350 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 3354921-3364920 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110685 5260 Chlorophyte View MSA
123426579 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.747        
cufflinks 2.425        
cufflinks 5.09        
cufflinks 3.515        
cufflinks 4.538        
cufflinks 4.228        
cufflinks 3.394        
cufflinks 4.838        
cufflinks 4.4        
cufflinks 3.364        
cufflinks 0.987       Low
cufflinks 3.772        
cufflinks 4.751        
cufflinks 1.168       Low
cufflinks 3.681        
cufflinks 3.554        
cufflinks 3.941        
cufflinks 3.602        
cufflinks 4.054        
cufflinks 0.861       Low
cufflinks 6.164       High
cufflinks 3.315        
cufflinks 4.617        
cufflinks 4.156        
cufflinks 3.466        
cufflinks 12.3076 1.01689 23.5982    
cufflinks 15.0351 4.04089 26.0292    
cufflinks 5.19623 0.0 10.5343   Low
cufflinks 9.1518 0.998879 17.3047    
cufflinks 12.9057 2.21469 23.5966   High

0 Strain