Gene : Cre05.g234300 C. reinhardtii v5.6
Defline:  (1 of 1) K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Genomic Order:  9
Name:  ? Cre05.g234300 Secondary Identifier:  ? PAC:30783220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g234300 0.5kb upstream 0.5kb upstream 4396 true chromosome_5: 184843-189238 Chlamydomonas reinhardtii
Cre05.g234300 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 188739-189238 Chlamydomonas reinhardtii
Cre05.g234300 0.5kb downstream 0.5kb downstream 4396 true chromosome_5: 184343-188738 Chlamydomonas reinhardtii
Cre05.g234300 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 184343-184842 Chlamydomonas reinhardtii
Cre05.g234300 1.0kb upstream 1.0kb upstream 4896 true chromosome_5: 184843-189738 Chlamydomonas reinhardtii
Cre05.g234300 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 188739-189738 Chlamydomonas reinhardtii
Cre05.g234300 1.0kb downstream 1.0kb downstream 4896 true chromosome_5: 183843-188738 Chlamydomonas reinhardtii
Cre05.g234300 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 183843-184842 Chlamydomonas reinhardtii
Cre05.g234300 2.0kb upstream 2.0kb upstream 5896 true chromosome_5: 184843-190738 Chlamydomonas reinhardtii
Cre05.g234300 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 188739-190738 Chlamydomonas reinhardtii
Cre05.g234300 2.0kb downstream 2.0kb downstream 5896 true chromosome_5: 182843-188738 Chlamydomonas reinhardtii
Cre05.g234300 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 182843-184842 Chlamydomonas reinhardtii
Cre05.g234300 5.0kb upstream 5.0kb upstream 8896 true chromosome_5: 184843-193738 Chlamydomonas reinhardtii
Cre05.g234300 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 188739-193738 Chlamydomonas reinhardtii
Cre05.g234300 5.0kb downstream 5.0kb downstream 8896 true chromosome_5: 179843-188738 Chlamydomonas reinhardtii
Cre05.g234300 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 179843-184842 Chlamydomonas reinhardtii
Cre05.g234300 10.0kb upstream 10.0kb upstream 13896 true chromosome_5: 184843-198738 Chlamydomonas reinhardtii
Cre05.g234300 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 188739-198738 Chlamydomonas reinhardtii
Cre05.g234300 10.0kb downstream 10.0kb downstream 13896 true chromosome_5: 174843-188738 Chlamydomonas reinhardtii
Cre05.g234300 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 174843-184842 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108598 5260 Chlorophyte View MSA
123424538 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.443       Low
cufflinks 14.306        
cufflinks 14.395     High  
cufflinks 11.525        
cufflinks 13.42     High  
cufflinks 11.771        
cufflinks 16.965     High High
cufflinks 14.982       High
cufflinks 7.927        
cufflinks 5.67       Low
cufflinks 9.877        
cufflinks 12.741        
cufflinks 10.633     High  
cufflinks 12.038        
cufflinks 7.496        
cufflinks 9.18        
cufflinks 8.289        
cufflinks 11.884        
cufflinks 2.759       Low
cufflinks 11.287        
cufflinks 8.922        
cufflinks 6.26       Low
cufflinks 10.792        
cufflinks 12.09        
cufflinks 8.185        
cufflinks 16.4201 1.70285 31.1373   Low
cufflinks 29.714 7.90463 51.5235 High  
cufflinks 26.0224 0.0 52.5103    
cufflinks 18.7192 1.7111 35.7272    
cufflinks 22.4537 3.83877 41.0686    

0 Strain