Gene : Cre04.g218400 C. reinhardtii v5.6
Defline:  (1 of 55) PF00651 - BTB/POZ domain (BTB) Genomic Order:  251
Name:  ? Cre04.g218400 Secondary Identifier:  ? PAC:30791211
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g218400 0.5kb upstream 0.5kb upstream 4212 true chromosome_4: 1944803-1949014 Chlamydomonas reinhardtii
Cre04.g218400 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 1944803-1945302 Chlamydomonas reinhardtii
Cre04.g218400 0.5kb downstream 0.5kb downstream 4212 true chromosome_4: 1945303-1949514 Chlamydomonas reinhardtii
Cre04.g218400 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 1949015-1949514 Chlamydomonas reinhardtii
Cre04.g218400 1.0kb upstream 1.0kb upstream 4712 true chromosome_4: 1944303-1949014 Chlamydomonas reinhardtii
Cre04.g218400 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 1944303-1945302 Chlamydomonas reinhardtii
Cre04.g218400 1.0kb downstream 1.0kb downstream 4712 true chromosome_4: 1945303-1950014 Chlamydomonas reinhardtii
Cre04.g218400 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 1949015-1950014 Chlamydomonas reinhardtii
Cre04.g218400 2.0kb upstream 2.0kb upstream 5712 true chromosome_4: 1943303-1949014 Chlamydomonas reinhardtii
Cre04.g218400 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 1943303-1945302 Chlamydomonas reinhardtii
Cre04.g218400 2.0kb downstream 2.0kb downstream 5712 true chromosome_4: 1945303-1951014 Chlamydomonas reinhardtii
Cre04.g218400 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 1949015-1951014 Chlamydomonas reinhardtii
Cre04.g218400 5.0kb upstream 5.0kb upstream 8712 true chromosome_4: 1940303-1949014 Chlamydomonas reinhardtii
Cre04.g218400 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 1940303-1945302 Chlamydomonas reinhardtii
Cre04.g218400 5.0kb downstream 5.0kb downstream 8712 true chromosome_4: 1945303-1954014 Chlamydomonas reinhardtii
Cre04.g218400 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 1949015-1954014 Chlamydomonas reinhardtii
Cre04.g218400 10.0kb upstream 10.0kb upstream 13712 true chromosome_4: 1935303-1949014 Chlamydomonas reinhardtii
Cre04.g218400 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 1935303-1945302 Chlamydomonas reinhardtii
Cre04.g218400 10.0kb downstream 10.0kb downstream 13712 true chromosome_4: 1945303-1959014 Chlamydomonas reinhardtii
Cre04.g218400 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 1949015-1959014 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094118 5260 Chlorophyte View MSA
123429159 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.767       Low
cufflinks 4.637        
cufflinks 2.804        
cufflinks 3.498        
cufflinks 3.813        
cufflinks 3.366        
cufflinks 5.182       High
cufflinks 4.79        
cufflinks 2.489        
cufflinks 1.125       Low
cufflinks 2.803        
cufflinks 4.876        
cufflinks 1.707       Low
cufflinks 2.933        
cufflinks 3.881        
cufflinks 2.821        
cufflinks 2.677        
cufflinks 2.884        
cufflinks 0.596       Low
cufflinks 3.08        
cufflinks 3.026        
cufflinks 3.307        
cufflinks 6.296       High
cufflinks 4.313        
cufflinks 3.895        
cufflinks 5.3993 0.820024 9.97858   High
cufflinks 2.74775 0.504251 4.99126    
cufflinks 5.74688 0.0 11.5677    
cufflinks 3.1521 0.532069 5.77214    
cufflinks 2.66003 0.349602 4.97046    

0 Strain