Gene : Cre04.g219600 C. reinhardtii v5.6
Defline:  (1 of 55) PF00651 - BTB/POZ domain (BTB) Genomic Order:  277
Name:  ? Cre04.g219600 Secondary Identifier:  ? PAC:30791024
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g219600 0.5kb upstream 0.5kb upstream 4684 true chromosome_4: 2128222-2132905 Chlamydomonas reinhardtii
Cre04.g219600 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 2132406-2132905 Chlamydomonas reinhardtii
Cre04.g219600 0.5kb downstream 0.5kb downstream 4684 true chromosome_4: 2127722-2132405 Chlamydomonas reinhardtii
Cre04.g219600 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 2127722-2128221 Chlamydomonas reinhardtii
Cre04.g219600 1.0kb upstream 1.0kb upstream 5184 true chromosome_4: 2128222-2133405 Chlamydomonas reinhardtii
Cre04.g219600 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 2132406-2133405 Chlamydomonas reinhardtii
Cre04.g219600 1.0kb downstream 1.0kb downstream 5184 true chromosome_4: 2127222-2132405 Chlamydomonas reinhardtii
Cre04.g219600 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 2127222-2128221 Chlamydomonas reinhardtii
Cre04.g219600 2.0kb upstream 2.0kb upstream 6184 true chromosome_4: 2128222-2134405 Chlamydomonas reinhardtii
Cre04.g219600 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 2132406-2134405 Chlamydomonas reinhardtii
Cre04.g219600 2.0kb downstream 2.0kb downstream 6184 true chromosome_4: 2126222-2132405 Chlamydomonas reinhardtii
Cre04.g219600 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 2126222-2128221 Chlamydomonas reinhardtii
Cre04.g219600 5.0kb upstream 5.0kb upstream 9184 true chromosome_4: 2128222-2137405 Chlamydomonas reinhardtii
Cre04.g219600 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 2132406-2137405 Chlamydomonas reinhardtii
Cre04.g219600 5.0kb downstream 5.0kb downstream 9184 true chromosome_4: 2123222-2132405 Chlamydomonas reinhardtii
Cre04.g219600 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 2123222-2128221 Chlamydomonas reinhardtii
Cre04.g219600 10.0kb upstream 10.0kb upstream 14184 true chromosome_4: 2128222-2142405 Chlamydomonas reinhardtii
Cre04.g219600 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 2132406-2142405 Chlamydomonas reinhardtii
Cre04.g219600 10.0kb downstream 10.0kb downstream 14184 true chromosome_4: 2118222-2132405 Chlamydomonas reinhardtii
Cre04.g219600 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 2118222-2128221 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094118 5260 Chlorophyte View MSA
123429159 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.764        
cufflinks 2.54        
cufflinks 11.936       High
cufflinks 9.713       High
cufflinks 2.981        
cufflinks 2.548        
cufflinks 2.077        
cufflinks 7.382        
cufflinks 2.189        
cufflinks 1.153       Low
cufflinks 8.92       High
cufflinks 4.532        
cufflinks 5.775        
cufflinks 2.611        
cufflinks 5.87        
cufflinks 2.577        
cufflinks 4.964        
cufflinks 7.237        
cufflinks 1.148       Low
cufflinks 5.104        
cufflinks 4.825        
cufflinks 3.501        
cufflinks 2.631        
cufflinks 11.384       High
cufflinks 3.641        
cufflinks 0.264417 0.0 0.571433   Low
cufflinks 3.96091 0.858484 7.06333   Low
cufflinks 7.20595 0.0 14.5171    
cufflinks 4.89223 0.797547 8.98691    
cufflinks 5.25898 1.0166 9.50137   Low

0 Strain