Gene : Cre04.g219400 C. reinhardtii v5.6
Defline:  (1 of 55) PF00651 - BTB/POZ domain (BTB) Genomic Order:  272
Name:  ? Cre04.g219400 Secondary Identifier:  ? PAC:30791539
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g219400 0.5kb upstream 0.5kb upstream 4712 true chromosome_4: 2105806-2110517 Chlamydomonas reinhardtii
Cre04.g219400 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 2105806-2106305 Chlamydomonas reinhardtii
Cre04.g219400 0.5kb downstream 0.5kb downstream 4712 true chromosome_4: 2106306-2111017 Chlamydomonas reinhardtii
Cre04.g219400 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 2110518-2111017 Chlamydomonas reinhardtii
Cre04.g219400 1.0kb upstream 1.0kb upstream 5212 true chromosome_4: 2105306-2110517 Chlamydomonas reinhardtii
Cre04.g219400 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 2105306-2106305 Chlamydomonas reinhardtii
Cre04.g219400 1.0kb downstream 1.0kb downstream 5212 true chromosome_4: 2106306-2111517 Chlamydomonas reinhardtii
Cre04.g219400 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 2110518-2111517 Chlamydomonas reinhardtii
Cre04.g219400 2.0kb upstream 2.0kb upstream 6212 true chromosome_4: 2104306-2110517 Chlamydomonas reinhardtii
Cre04.g219400 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 2104306-2106305 Chlamydomonas reinhardtii
Cre04.g219400 2.0kb downstream 2.0kb downstream 6212 true chromosome_4: 2106306-2112517 Chlamydomonas reinhardtii
Cre04.g219400 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 2110518-2112517 Chlamydomonas reinhardtii
Cre04.g219400 5.0kb upstream 5.0kb upstream 9212 true chromosome_4: 2101306-2110517 Chlamydomonas reinhardtii
Cre04.g219400 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 2101306-2106305 Chlamydomonas reinhardtii
Cre04.g219400 5.0kb downstream 5.0kb downstream 9212 true chromosome_4: 2106306-2115517 Chlamydomonas reinhardtii
Cre04.g219400 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 2110518-2115517 Chlamydomonas reinhardtii
Cre04.g219400 10.0kb upstream 10.0kb upstream 14212 true chromosome_4: 2096306-2110517 Chlamydomonas reinhardtii
Cre04.g219400 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 2096306-2106305 Chlamydomonas reinhardtii
Cre04.g219400 10.0kb downstream 10.0kb downstream 14212 true chromosome_4: 2106306-2120517 Chlamydomonas reinhardtii
Cre04.g219400 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 2110518-2120517 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094118 5260 Chlorophyte View MSA
123429159 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.22        
cufflinks 1.858        
cufflinks 1.488        
cufflinks 1.745        
cufflinks 1.964        
cufflinks 1.633        
cufflinks 1.848        
cufflinks 1.674        
cufflinks 1.7        
cufflinks 0.539       Low
cufflinks 1.358        
cufflinks 2.122        
cufflinks 0.706       Low
cufflinks 1.6        
cufflinks 1.575        
cufflinks 2.156        
cufflinks 1.699        
cufflinks 1.726        
cufflinks 0.339       Low
cufflinks 1.932        
cufflinks 1.498        
cufflinks 1.728        
cufflinks 1.076        
cufflinks 2.085        
cufflinks 2.2        
cufflinks 4.49635 0.762937 8.22976    
cufflinks 4.05215 0.93702 7.16729   High
cufflinks 1.76007 0.0 3.95037    
cufflinks 1.9942 0.222117 3.76628   Low
cufflinks 4.5274 0.833156 8.22165   High

0 Strain