Gene : Cre04.g220250 C. reinhardtii v5.6
Defline:  (1 of 55) PF00651 - BTB/POZ domain (BTB) Genomic Order:  295
Name:  ? Cre04.g220250 Secondary Identifier:  ? PAC:30791566
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g220250 0.5kb upstream 0.5kb upstream 5417 true chromosome_4: 2271171-2276587 Chlamydomonas reinhardtii
Cre04.g220250 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 2276088-2276587 Chlamydomonas reinhardtii
Cre04.g220250 0.5kb downstream 0.5kb downstream 5417 true chromosome_4: 2270671-2276087 Chlamydomonas reinhardtii
Cre04.g220250 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 2270671-2271170 Chlamydomonas reinhardtii
Cre04.g220250 1.0kb upstream 1.0kb upstream 5917 true chromosome_4: 2271171-2277087 Chlamydomonas reinhardtii
Cre04.g220250 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 2276088-2277087 Chlamydomonas reinhardtii
Cre04.g220250 1.0kb downstream 1.0kb downstream 5917 true chromosome_4: 2270171-2276087 Chlamydomonas reinhardtii
Cre04.g220250 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 2270171-2271170 Chlamydomonas reinhardtii
Cre04.g220250 2.0kb upstream 2.0kb upstream 6917 true chromosome_4: 2271171-2278087 Chlamydomonas reinhardtii
Cre04.g220250 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 2276088-2278087 Chlamydomonas reinhardtii
Cre04.g220250 2.0kb downstream 2.0kb downstream 6917 true chromosome_4: 2269171-2276087 Chlamydomonas reinhardtii
Cre04.g220250 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 2269171-2271170 Chlamydomonas reinhardtii
Cre04.g220250 5.0kb upstream 5.0kb upstream 9917 true chromosome_4: 2271171-2281087 Chlamydomonas reinhardtii
Cre04.g220250 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 2276088-2281087 Chlamydomonas reinhardtii
Cre04.g220250 5.0kb downstream 5.0kb downstream 9917 true chromosome_4: 2266171-2276087 Chlamydomonas reinhardtii
Cre04.g220250 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 2266171-2271170 Chlamydomonas reinhardtii
Cre04.g220250 10.0kb upstream 10.0kb upstream 14917 true chromosome_4: 2271171-2286087 Chlamydomonas reinhardtii
Cre04.g220250 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 2276088-2286087 Chlamydomonas reinhardtii
Cre04.g220250 10.0kb downstream 10.0kb downstream 14917 true chromosome_4: 2261171-2276087 Chlamydomonas reinhardtii
Cre04.g220250 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 2261171-2271170 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094118 5260 Chlorophyte View MSA
123429159 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.303        
cufflinks 0.454        
cufflinks 0.569        
cufflinks 0.139     Low  
cufflinks 0.27        
cufflinks 0.513        
cufflinks 0.658        
cufflinks 0.005     Low Low
cufflinks 0.136        
cufflinks 0.421        
cufflinks 0.52        
cufflinks 0.23        
cufflinks 0.232        
cufflinks 0.395        
cufflinks 0.027     Low Low
cufflinks 0.02     Low Low
cufflinks 0.22        
cufflinks 0.15        
cufflinks 0.677        
cufflinks 0.309        
cufflinks 0.004     Low Low
cufflinks 0.563        
cufflinks 0.482        
cufflinks 0.019     Low Low
cufflinks 0.0183229 0.0 0.0559562 Low Low
cufflinks 0.804318 0.0 1.73153    
cufflinks 0.876222 0.0 2.1222    
cufflinks 0.693737 0.0 1.39746    
cufflinks 1.52834 0.0984987 2.95818    

0 Strain