Gene : Cre05.g245352 C. reinhardtii v5.6
Defline:  (1 of 1) PF00059//PF00530//PF00704//PF14295 - Lectin C-type domain (Lectin_C) // Scavenger receptor cysteine-rich domain (SRCR) // Glycosyl hydrolases family 18 (Glyco_hydro_18) // PAN domain (PAN_4) Genomic Order:  148
Name:  ? Cre05.g245352 Secondary Identifier:  ? PAC:30783147
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6902 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g245352 0.5kb upstream 0.5kb upstream 37956 true chromosome_5: 1230113-1268068 Chlamydomonas reinhardtii
Cre05.g245352 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 1267569-1268068 Chlamydomonas reinhardtii
Cre05.g245352 0.5kb downstream 0.5kb downstream 37956 true chromosome_5: 1229613-1267568 Chlamydomonas reinhardtii
Cre05.g245352 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 1229613-1230112 Chlamydomonas reinhardtii
Cre05.g245352 1.0kb upstream 1.0kb upstream 38456 true chromosome_5: 1230113-1268568 Chlamydomonas reinhardtii
Cre05.g245352 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 1267569-1268568 Chlamydomonas reinhardtii
Cre05.g245352 1.0kb downstream 1.0kb downstream 38456 true chromosome_5: 1229113-1267568 Chlamydomonas reinhardtii
Cre05.g245352 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 1229113-1230112 Chlamydomonas reinhardtii
Cre05.g245352 2.0kb upstream 2.0kb upstream 39456 true chromosome_5: 1230113-1269568 Chlamydomonas reinhardtii
Cre05.g245352 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 1267569-1269568 Chlamydomonas reinhardtii
Cre05.g245352 2.0kb downstream 2.0kb downstream 39456 true chromosome_5: 1228113-1267568 Chlamydomonas reinhardtii
Cre05.g245352 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 1228113-1230112 Chlamydomonas reinhardtii
Cre05.g245352 5.0kb upstream 5.0kb upstream 42456 true chromosome_5: 1230113-1272568 Chlamydomonas reinhardtii
Cre05.g245352 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 1267569-1272568 Chlamydomonas reinhardtii
Cre05.g245352 5.0kb downstream 5.0kb downstream 42456 true chromosome_5: 1225113-1267568 Chlamydomonas reinhardtii
Cre05.g245352 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 1225113-1230112 Chlamydomonas reinhardtii
Cre05.g245352 10.0kb upstream 10.0kb upstream 47456 true chromosome_5: 1230113-1277568 Chlamydomonas reinhardtii
Cre05.g245352 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 1267569-1277568 Chlamydomonas reinhardtii
Cre05.g245352 10.0kb downstream 10.0kb downstream 47456 true chromosome_5: 1220113-1267568 Chlamydomonas reinhardtii
Cre05.g245352 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 1220113-1230112 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081893 5260 Chlorophyte View MSA
123399595 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.035     Low  
cufflinks 0.127     Low  
cufflinks 0.077     Low  
cufflinks 0.069     Low  
cufflinks 0.082     Low  
cufflinks 0.037     Low  
cufflinks 0.099     Low  
cufflinks 0.107     Low  
cufflinks 0.063     Low  
cufflinks 0.006     Low Low
cufflinks 0.13     Low  
cufflinks 0.101     Low  
cufflinks 0.005     Low Low
cufflinks 0.045     Low  
cufflinks 0.08     Low  
cufflinks 0.052     Low  
cufflinks 0.11     Low  
cufflinks 0.08     Low  
cufflinks 0.011     Low Low
cufflinks 0.139     Low  
cufflinks 0.075     Low  
cufflinks 0.051     Low  
cufflinks 0.063     Low  
cufflinks 0.155     Low High
cufflinks 0.158       High
cufflinks 1.08835 0.177144 1.99956    
cufflinks 0.284829 0.0 0.618243 Low  
cufflinks 0.270844 0.0 0.638281 Low  
cufflinks 0.885849 0.00475469 1.76694    
cufflinks 7.1787 0.0 14.773   High

0 Strain