Gene : Cre05.g247550 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN Genomic Order:  101
Name:  ? Cre05.g247550 Secondary Identifier:  ? PAC:30783275
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6842 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g247550 0.5kb upstream 0.5kb upstream 5594 true chromosome_5: 877783-883376 Chlamydomonas reinhardtii
Cre05.g247550 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 877783-878282 Chlamydomonas reinhardtii
Cre05.g247550 0.5kb downstream 0.5kb downstream 5594 true chromosome_5: 878283-883876 Chlamydomonas reinhardtii
Cre05.g247550 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 883377-883876 Chlamydomonas reinhardtii
Cre05.g247550 1.0kb upstream 1.0kb upstream 6094 true chromosome_5: 877283-883376 Chlamydomonas reinhardtii
Cre05.g247550 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 877283-878282 Chlamydomonas reinhardtii
Cre05.g247550 1.0kb downstream 1.0kb downstream 6094 true chromosome_5: 878283-884376 Chlamydomonas reinhardtii
Cre05.g247550 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 883377-884376 Chlamydomonas reinhardtii
Cre05.g247550 2.0kb upstream 2.0kb upstream 7094 true chromosome_5: 876283-883376 Chlamydomonas reinhardtii
Cre05.g247550 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 876283-878282 Chlamydomonas reinhardtii
Cre05.g247550 2.0kb downstream 2.0kb downstream 7094 true chromosome_5: 878283-885376 Chlamydomonas reinhardtii
Cre05.g247550 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 883377-885376 Chlamydomonas reinhardtii
Cre05.g247550 5.0kb upstream 5.0kb upstream 10094 true chromosome_5: 873283-883376 Chlamydomonas reinhardtii
Cre05.g247550 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 873283-878282 Chlamydomonas reinhardtii
Cre05.g247550 5.0kb downstream 5.0kb downstream 10094 true chromosome_5: 878283-888376 Chlamydomonas reinhardtii
Cre05.g247550 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 883377-888376 Chlamydomonas reinhardtii
Cre05.g247550 10.0kb upstream 10.0kb upstream 15094 true chromosome_5: 868283-883376 Chlamydomonas reinhardtii
Cre05.g247550 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 868283-878282 Chlamydomonas reinhardtii
Cre05.g247550 10.0kb downstream 10.0kb downstream 15094 true chromosome_5: 878283-893376 Chlamydomonas reinhardtii
Cre05.g247550 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 883377-893376 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110629 5260 Chlorophyte View MSA
123428193 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.623       Low
cufflinks 1.497        
cufflinks 2.133        
cufflinks 2.471       High
cufflinks 1.741        
cufflinks 1.332        
cufflinks 2.383        
cufflinks 2.121        
cufflinks 0.551       Low
cufflinks 1.006        
cufflinks 2.855       High
cufflinks 1.448        
cufflinks 1.526        
cufflinks 1.293        
cufflinks 1.653        
cufflinks 0.46       Low
cufflinks 1.416        
cufflinks 1.8        
cufflinks 1.963        
cufflinks 3.788       High
cufflinks 1.775        
cufflinks 1.16        
cufflinks 1.453        
cufflinks 1.972        
cufflinks 1.328        
cufflinks 4.4504 0.476084 8.42472   High
cufflinks 5.37712 0.446167 10.3081    
cufflinks 10.8645 0.0 22.3649    
cufflinks 6.12364 0.878821 11.3685   High
cufflinks 3.94466 0.2312 7.65811   Low

0 Strain