Gene : CGL55 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g249650 Defline:  (1 of 1) PF03031//PF12738 - NLI interacting factor-like phosphatase (NIF) // twin BRCT domain (PTCB-BRCT)
Genomic Order:  20 Name:  ? Cre06.g249650
Secondary Identifier:  ? PAC:30779427
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g249650 0.5kb upstream 0.5kb upstream 5776 true chromosome_6: 92030-97805 Chlamydomonas reinhardtii
Cre06.g249650 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 97306-97805 Chlamydomonas reinhardtii
Cre06.g249650 0.5kb downstream 0.5kb downstream 5776 true chromosome_6: 91530-97305 Chlamydomonas reinhardtii
Cre06.g249650 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 91530-92029 Chlamydomonas reinhardtii
Cre06.g249650 1.0kb upstream 1.0kb upstream 6276 true chromosome_6: 92030-98305 Chlamydomonas reinhardtii
Cre06.g249650 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 97306-98305 Chlamydomonas reinhardtii
Cre06.g249650 1.0kb downstream 1.0kb downstream 6276 true chromosome_6: 91030-97305 Chlamydomonas reinhardtii
Cre06.g249650 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 91030-92029 Chlamydomonas reinhardtii
Cre06.g249650 2.0kb upstream 2.0kb upstream 7276 true chromosome_6: 92030-99305 Chlamydomonas reinhardtii
Cre06.g249650 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 97306-99305 Chlamydomonas reinhardtii
Cre06.g249650 2.0kb downstream 2.0kb downstream 7276 true chromosome_6: 90030-97305 Chlamydomonas reinhardtii
Cre06.g249650 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 90030-92029 Chlamydomonas reinhardtii
Cre06.g249650 5.0kb upstream 5.0kb upstream 10276 true chromosome_6: 92030-102305 Chlamydomonas reinhardtii
Cre06.g249650 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 97306-102305 Chlamydomonas reinhardtii
Cre06.g249650 5.0kb downstream 5.0kb downstream 10276 true chromosome_6: 87030-97305 Chlamydomonas reinhardtii
Cre06.g249650 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 87030-92029 Chlamydomonas reinhardtii
Cre06.g249650 10.0kb upstream 10.0kb upstream 15276 true chromosome_6: 92030-107305 Chlamydomonas reinhardtii
Cre06.g249650 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 97306-107305 Chlamydomonas reinhardtii
Cre06.g249650 10.0kb downstream 10.0kb downstream 15276 true chromosome_6: 82030-97305 Chlamydomonas reinhardtii
Cre06.g249650 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 82030-92029 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124097806 5260 Chlorophyte View MSA
123423764 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.248       Low
cufflinks 1.088       High
cufflinks 0.642        
cufflinks 0.753        
cufflinks 0.72        
cufflinks 0.599        
cufflinks 1.356       High
cufflinks 1.167       High
cufflinks 0.503        
cufflinks 0.13       Low
cufflinks 0.521        
cufflinks 0.866        
cufflinks 0.445        
cufflinks 0.52        
cufflinks 0.654        
cufflinks 0.273       Low
cufflinks 0.421        
cufflinks 0.524        
cufflinks 0.596        
cufflinks 1.097       High
cufflinks 0.597        
cufflinks 0.448        
cufflinks 1.678       High
cufflinks 0.708        
cufflinks 0.708        
cufflinks 1.19055 0.0 2.61021   High
cufflinks 3.34458 0.501647 6.18752    
cufflinks 1.58635 0.0 4.16044    
cufflinks 3.11823 0.0191895 6.21728    
cufflinks 2.29931 0.204361 4.39426    

0 Strain