Gene : Cre05.g248250 C. reinhardtii v5.6
Defline:  (1 of 1) 1.4.1.24 - 3-dehydroquinate synthase II / DHQ synthase II Genomic Order:  88
Name:  ? Cre05.g248250 Secondary Identifier:  ? PAC:30783374
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g248250 0.5kb upstream 0.5kb upstream 7556 true chromosome_5: 788663-796218 Chlamydomonas reinhardtii
Cre05.g248250 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 788663-789162 Chlamydomonas reinhardtii
Cre05.g248250 0.5kb downstream 0.5kb downstream 7556 true chromosome_5: 789163-796718 Chlamydomonas reinhardtii
Cre05.g248250 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 796219-796718 Chlamydomonas reinhardtii
Cre05.g248250 1.0kb upstream 1.0kb upstream 8056 true chromosome_5: 788163-796218 Chlamydomonas reinhardtii
Cre05.g248250 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 788163-789162 Chlamydomonas reinhardtii
Cre05.g248250 1.0kb downstream 1.0kb downstream 8056 true chromosome_5: 789163-797218 Chlamydomonas reinhardtii
Cre05.g248250 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 796219-797218 Chlamydomonas reinhardtii
Cre05.g248250 2.0kb upstream 2.0kb upstream 9056 true chromosome_5: 787163-796218 Chlamydomonas reinhardtii
Cre05.g248250 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 787163-789162 Chlamydomonas reinhardtii
Cre05.g248250 2.0kb downstream 2.0kb downstream 9056 true chromosome_5: 789163-798218 Chlamydomonas reinhardtii
Cre05.g248250 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 796219-798218 Chlamydomonas reinhardtii
Cre05.g248250 5.0kb upstream 5.0kb upstream 12056 true chromosome_5: 784163-796218 Chlamydomonas reinhardtii
Cre05.g248250 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 784163-789162 Chlamydomonas reinhardtii
Cre05.g248250 5.0kb downstream 5.0kb downstream 12056 true chromosome_5: 789163-801218 Chlamydomonas reinhardtii
Cre05.g248250 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 796219-801218 Chlamydomonas reinhardtii
Cre05.g248250 10.0kb upstream 10.0kb upstream 17056 true chromosome_5: 779163-796218 Chlamydomonas reinhardtii
Cre05.g248250 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 779163-789162 Chlamydomonas reinhardtii
Cre05.g248250 10.0kb downstream 10.0kb downstream 17056 true chromosome_5: 789163-806218 Chlamydomonas reinhardtii
Cre05.g248250 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 796219-806218 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109775 5260 Chlorophyte View MSA
123427412 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.522        
cufflinks 0.51        
cufflinks 0.68        
cufflinks 0.398        
cufflinks 0.385        
cufflinks 0.596        
cufflinks 0.594        
cufflinks 0.585        
cufflinks 0.591        
cufflinks 0.193       Low
cufflinks 0.334        
cufflinks 0.519        
cufflinks 0.616        
cufflinks 0.607        
cufflinks 0.486        
cufflinks 0.863       High
cufflinks 0.519        
cufflinks 0.391        
cufflinks 0.101       Low
cufflinks 0.562        
cufflinks 0.503        
cufflinks 0.553        
cufflinks 0.411        
cufflinks 0.464        
cufflinks 0.54        
cufflinks 0.126829 0.0 0.290438 Low Low
cufflinks 1.46753 0.0487511 2.88631    
cufflinks 0.132513 0.0 0.435181 Low Low
cufflinks 0.750842 0.00243787 1.49925    
cufflinks 1.35125 0.0453965 2.65711    

0 Strain