Gene : Cre06.g256420 C. reinhardtii v5.6
Defline:  (1 of 1) K15196 - transcription factor IIIB 90 kDa subunit (BRF1, GTF3B) Genomic Order:  183
Name:  ? Cre06.g256420 Secondary Identifier:  ? PAC:30778633
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g256420 0.5kb upstream 0.5kb upstream 7216 true chromosome_6: 1051500-1058715 Chlamydomonas reinhardtii
Cre06.g256420 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 1058216-1058715 Chlamydomonas reinhardtii
Cre06.g256420 0.5kb downstream 0.5kb downstream 7216 true chromosome_6: 1051000-1058215 Chlamydomonas reinhardtii
Cre06.g256420 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 1051000-1051499 Chlamydomonas reinhardtii
Cre06.g256420 1.0kb upstream 1.0kb upstream 7716 true chromosome_6: 1051500-1059215 Chlamydomonas reinhardtii
Cre06.g256420 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 1058216-1059215 Chlamydomonas reinhardtii
Cre06.g256420 1.0kb downstream 1.0kb downstream 7716 true chromosome_6: 1050500-1058215 Chlamydomonas reinhardtii
Cre06.g256420 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 1050500-1051499 Chlamydomonas reinhardtii
Cre06.g256420 2.0kb upstream 2.0kb upstream 8716 true chromosome_6: 1051500-1060215 Chlamydomonas reinhardtii
Cre06.g256420 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 1058216-1060215 Chlamydomonas reinhardtii
Cre06.g256420 2.0kb downstream 2.0kb downstream 8716 true chromosome_6: 1049500-1058215 Chlamydomonas reinhardtii
Cre06.g256420 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 1049500-1051499 Chlamydomonas reinhardtii
Cre06.g256420 5.0kb upstream 5.0kb upstream 11716 true chromosome_6: 1051500-1063215 Chlamydomonas reinhardtii
Cre06.g256420 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 1058216-1063215 Chlamydomonas reinhardtii
Cre06.g256420 5.0kb downstream 5.0kb downstream 11716 true chromosome_6: 1046500-1058215 Chlamydomonas reinhardtii
Cre06.g256420 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 1046500-1051499 Chlamydomonas reinhardtii
Cre06.g256420 10.0kb upstream 10.0kb upstream 16716 true chromosome_6: 1051500-1068215 Chlamydomonas reinhardtii
Cre06.g256420 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 1058216-1068215 Chlamydomonas reinhardtii
Cre06.g256420 10.0kb downstream 10.0kb downstream 16716 true chromosome_6: 1041500-1058215 Chlamydomonas reinhardtii
Cre06.g256420 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 1041500-1051499 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111937 5260 Chlorophyte View MSA
123427604 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.44       Low
cufflinks 1.097        
cufflinks 0.618        
cufflinks 0.969        
cufflinks 0.822        
cufflinks 0.69        
cufflinks 1.162        
cufflinks 1.242        
cufflinks 0.917        
cufflinks 0.201       Low
cufflinks 0.898        
cufflinks 1.065        
cufflinks 0.384       Low
cufflinks 0.766        
cufflinks 0.861        
cufflinks 0.635        
cufflinks 1.082        
cufflinks 0.635        
cufflinks 0.262       Low
cufflinks 1.622       High
cufflinks 1.049        
cufflinks 0.871        
cufflinks 1.092        
cufflinks 1.19        
cufflinks 0.932        
cufflinks 4.63838 0.750013 8.52675   High
cufflinks 4.45576 0.999657 7.91187    
cufflinks 1.69525 0.0 3.79516   Low
cufflinks 2.80898 0.452524 5.16545    
cufflinks 4.53754 0.855355 8.21973    

0 Strain