Gene : Cre05.g238500 C. reinhardtii v5.6
Defline:  (1 of 4) K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) Genomic Order:  401
Name:  ? Cre05.g238500 Secondary Identifier:  ? PAC:30783033
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g238500 0.5kb upstream 0.5kb upstream 6642 true chromosome_5: 3018126-3024767 Chlamydomonas reinhardtii
Cre05.g238500 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 3018126-3018625 Chlamydomonas reinhardtii
Cre05.g238500 0.5kb downstream 0.5kb downstream 6642 true chromosome_5: 3018626-3025267 Chlamydomonas reinhardtii
Cre05.g238500 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 3024768-3025267 Chlamydomonas reinhardtii
Cre05.g238500 1.0kb upstream 1.0kb upstream 7142 true chromosome_5: 3017626-3024767 Chlamydomonas reinhardtii
Cre05.g238500 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 3017626-3018625 Chlamydomonas reinhardtii
Cre05.g238500 1.0kb downstream 1.0kb downstream 7142 true chromosome_5: 3018626-3025767 Chlamydomonas reinhardtii
Cre05.g238500 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 3024768-3025767 Chlamydomonas reinhardtii
Cre05.g238500 2.0kb upstream 2.0kb upstream 8142 true chromosome_5: 3016626-3024767 Chlamydomonas reinhardtii
Cre05.g238500 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 3016626-3018625 Chlamydomonas reinhardtii
Cre05.g238500 2.0kb downstream 2.0kb downstream 8142 true chromosome_5: 3018626-3026767 Chlamydomonas reinhardtii
Cre05.g238500 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 3024768-3026767 Chlamydomonas reinhardtii
Cre05.g238500 5.0kb upstream 5.0kb upstream 11142 true chromosome_5: 3013626-3024767 Chlamydomonas reinhardtii
Cre05.g238500 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 3013626-3018625 Chlamydomonas reinhardtii
Cre05.g238500 5.0kb downstream 5.0kb downstream 11142 true chromosome_5: 3018626-3029767 Chlamydomonas reinhardtii
Cre05.g238500 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 3024768-3029767 Chlamydomonas reinhardtii
Cre05.g238500 10.0kb upstream 10.0kb upstream 16142 true chromosome_5: 3008626-3024767 Chlamydomonas reinhardtii
Cre05.g238500 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 3008626-3018625 Chlamydomonas reinhardtii
Cre05.g238500 10.0kb downstream 10.0kb downstream 16142 true chromosome_5: 3018626-3034767 Chlamydomonas reinhardtii
Cre05.g238500 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 3024768-3034767 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124085744 5260 Chlorophyte View MSA
123429187 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.514        
cufflinks 2.004        
cufflinks 1.048        
cufflinks 1.516        
cufflinks 1.771        
cufflinks 1.566        
cufflinks 0.659       Low
cufflinks 1.434        
cufflinks 2.991       High
cufflinks 0.731        
cufflinks 1.106        
cufflinks 1.553        
cufflinks 0.893        
cufflinks 1.697        
cufflinks 1.426        
cufflinks 2.974       High
cufflinks 2.786        
cufflinks 1.404        
cufflinks 0.132       Low
cufflinks 0.478       Low
cufflinks 1.431        
cufflinks 3.244       High
cufflinks 0.935        
cufflinks 1.891        
cufflinks 3.476       High
cufflinks 5.41148 0.919069 9.90389   High
cufflinks 10.8253 2.85977 18.7908    
cufflinks 2.51996 0.0 5.68649    
cufflinks 3.27884 0.450049 6.10763   Low
cufflinks 5.00967 0.842173 9.17717    

0 Strain