Gene : HDA13 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g277350 Defline:  (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2)
Genomic Order:  637 Name:  ? Cre06.g277350
Secondary Identifier:  ? PAC:30778526
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g277350 0.5kb upstream 0.5kb upstream 10692 true chromosome_6: 3316171-3326862 Chlamydomonas reinhardtii
Cre06.g277350 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 3316171-3316670 Chlamydomonas reinhardtii
Cre06.g277350 0.5kb downstream 0.5kb downstream 10692 true chromosome_6: 3316671-3327362 Chlamydomonas reinhardtii
Cre06.g277350 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 3326863-3327362 Chlamydomonas reinhardtii
Cre06.g277350 1.0kb upstream 1.0kb upstream 11192 true chromosome_6: 3315671-3326862 Chlamydomonas reinhardtii
Cre06.g277350 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 3315671-3316670 Chlamydomonas reinhardtii
Cre06.g277350 1.0kb downstream 1.0kb downstream 11192 true chromosome_6: 3316671-3327862 Chlamydomonas reinhardtii
Cre06.g277350 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 3326863-3327862 Chlamydomonas reinhardtii
Cre06.g277350 2.0kb upstream 2.0kb upstream 12192 true chromosome_6: 3314671-3326862 Chlamydomonas reinhardtii
Cre06.g277350 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 3314671-3316670 Chlamydomonas reinhardtii
Cre06.g277350 2.0kb downstream 2.0kb downstream 12192 true chromosome_6: 3316671-3328862 Chlamydomonas reinhardtii
Cre06.g277350 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 3326863-3328862 Chlamydomonas reinhardtii
Cre06.g277350 5.0kb upstream 5.0kb upstream 15192 true chromosome_6: 3311671-3326862 Chlamydomonas reinhardtii
Cre06.g277350 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 3311671-3316670 Chlamydomonas reinhardtii
Cre06.g277350 5.0kb downstream 5.0kb downstream 15192 true chromosome_6: 3316671-3331862 Chlamydomonas reinhardtii
Cre06.g277350 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 3326863-3331862 Chlamydomonas reinhardtii
Cre06.g277350 10.0kb upstream 10.0kb upstream 20192 true chromosome_6: 3306671-3326862 Chlamydomonas reinhardtii
Cre06.g277350 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 3306671-3316670 Chlamydomonas reinhardtii
Cre06.g277350 10.0kb downstream 10.0kb downstream 20192 true chromosome_6: 3316671-3336862 Chlamydomonas reinhardtii
Cre06.g277350 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 3326863-3336862 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111858 5260 Chlorophyte View MSA
123429001 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.362        
cufflinks 1.777        
cufflinks 1.852        
cufflinks 2.011        
cufflinks 1.628        
cufflinks 1.537        
cufflinks 2.756       High
cufflinks 2.667       High
cufflinks 1.006       Low
cufflinks 0.687       Low
cufflinks 1.874        
cufflinks 1.677        
cufflinks 1.705        
cufflinks 1.45        
cufflinks 1.472        
cufflinks 1.532        
cufflinks 1.354        
cufflinks 1.481        
cufflinks 0.802       Low
cufflinks 2.365       High
cufflinks 1.673        
cufflinks 1.425        
cufflinks 1.703        
cufflinks 2.271       High
cufflinks 1.465        
cufflinks 1.52781 0.0808773 2.97475    
cufflinks 5.80572 1.45702 10.1544   High
cufflinks 5.64141 0.0 11.4677   High
cufflinks 3.37205 0.508614 6.23548    
cufflinks 4.3854 0.79256 7.97824    

0 Strain