Gene : Cre06.g279700 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR15535:SF22 - PROTEIN RLIB Genomic Order:  893
Name:  ? Cre06.g279700 Secondary Identifier:  ? PAC:30779742
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g279700 0.5kb upstream 0.5kb upstream 19844 true chromosome_6: 4947458-4967301 Chlamydomonas reinhardtii
Cre06.g279700 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 4947458-4947957 Chlamydomonas reinhardtii
Cre06.g279700 0.5kb downstream 0.5kb downstream 19844 true chromosome_6: 4947958-4967801 Chlamydomonas reinhardtii
Cre06.g279700 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 4967302-4967801 Chlamydomonas reinhardtii
Cre06.g279700 1.0kb upstream 1.0kb upstream 20344 true chromosome_6: 4946958-4967301 Chlamydomonas reinhardtii
Cre06.g279700 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 4946958-4947957 Chlamydomonas reinhardtii
Cre06.g279700 1.0kb downstream 1.0kb downstream 20344 true chromosome_6: 4947958-4968301 Chlamydomonas reinhardtii
Cre06.g279700 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 4967302-4968301 Chlamydomonas reinhardtii
Cre06.g279700 2.0kb upstream 2.0kb upstream 21344 true chromosome_6: 4945958-4967301 Chlamydomonas reinhardtii
Cre06.g279700 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 4945958-4947957 Chlamydomonas reinhardtii
Cre06.g279700 2.0kb downstream 2.0kb downstream 21344 true chromosome_6: 4947958-4969301 Chlamydomonas reinhardtii
Cre06.g279700 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 4967302-4969301 Chlamydomonas reinhardtii
Cre06.g279700 5.0kb upstream 5.0kb upstream 24344 true chromosome_6: 4942958-4967301 Chlamydomonas reinhardtii
Cre06.g279700 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 4942958-4947957 Chlamydomonas reinhardtii
Cre06.g279700 5.0kb downstream 5.0kb downstream 24344 true chromosome_6: 4947958-4972301 Chlamydomonas reinhardtii
Cre06.g279700 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 4967302-4972301 Chlamydomonas reinhardtii
Cre06.g279700 10.0kb upstream 10.0kb upstream 29344 true chromosome_6: 4937958-4967301 Chlamydomonas reinhardtii
Cre06.g279700 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 4937958-4947957 Chlamydomonas reinhardtii
Cre06.g279700 10.0kb downstream 10.0kb downstream 29344 true chromosome_6: 4947958-4977301 Chlamydomonas reinhardtii
Cre06.g279700 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 4967302-4977301 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078000 5260 Chlorophyte Singleton cluster - no MSA
123395962 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.878       Low
cufflinks 2.485        
cufflinks 2.306        
cufflinks 2.358        
cufflinks 1.674        
cufflinks 3.605       High
cufflinks 1.154       Low
cufflinks 2.67        
cufflinks 0.911       Low
cufflinks 1.169        
cufflinks 1.745        
cufflinks 3.38        
cufflinks 1.474        
cufflinks 3.922       High
cufflinks 2.11        
cufflinks 2.674        
cufflinks 5.373       High
cufflinks 2.465        
cufflinks 0.477       Low
cufflinks 1.764        
cufflinks 2.234        
cufflinks 3.048        
cufflinks 1.277        
cufflinks 2.513        
cufflinks 3.134        
cufflinks 0.631876 0.0881676 1.17559    
cufflinks 6.88498 1.77514 11.9948    
cufflinks 4.9822 0.0 10.0685    
cufflinks 1.91994 0.258166 3.58172    
cufflinks 3.93216 0.669742 7.19458   Low

0 Strain