Gene : Cre06.g269650 C. reinhardtii v5.6
Defline:  (1 of 1) PF00686//PF02037 - Starch binding domain (CBM_20) // SAP domain (SAP) Genomic Order:  471
Name:  ? Cre06.g269650 Secondary Identifier:  ? PAC:30778446
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g269650 0.5kb upstream 0.5kb upstream 3473 true chromosome_6: 2607939-2611411 Chlamydomonas reinhardtii
Cre06.g269650 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 2610912-2611411 Chlamydomonas reinhardtii
Cre06.g269650 0.5kb downstream 0.5kb downstream 3473 true chromosome_6: 2607439-2610911 Chlamydomonas reinhardtii
Cre06.g269650 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 2607439-2607938 Chlamydomonas reinhardtii
Cre06.g269650 1.0kb upstream 1.0kb upstream 3973 true chromosome_6: 2607939-2611911 Chlamydomonas reinhardtii
Cre06.g269650 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 2610912-2611911 Chlamydomonas reinhardtii
Cre06.g269650 1.0kb downstream 1.0kb downstream 3973 true chromosome_6: 2606939-2610911 Chlamydomonas reinhardtii
Cre06.g269650 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 2606939-2607938 Chlamydomonas reinhardtii
Cre06.g269650 2.0kb upstream 2.0kb upstream 4973 true chromosome_6: 2607939-2612911 Chlamydomonas reinhardtii
Cre06.g269650 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 2610912-2612911 Chlamydomonas reinhardtii
Cre06.g269650 2.0kb downstream 2.0kb downstream 4973 true chromosome_6: 2605939-2610911 Chlamydomonas reinhardtii
Cre06.g269650 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 2605939-2607938 Chlamydomonas reinhardtii
Cre06.g269650 5.0kb upstream 5.0kb upstream 7973 true chromosome_6: 2607939-2615911 Chlamydomonas reinhardtii
Cre06.g269650 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 2610912-2615911 Chlamydomonas reinhardtii
Cre06.g269650 5.0kb downstream 5.0kb downstream 7973 true chromosome_6: 2602939-2610911 Chlamydomonas reinhardtii
Cre06.g269650 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 2602939-2607938 Chlamydomonas reinhardtii
Cre06.g269650 10.0kb upstream 10.0kb upstream 12973 true chromosome_6: 2607939-2620911 Chlamydomonas reinhardtii
Cre06.g269650 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 2610912-2620911 Chlamydomonas reinhardtii
Cre06.g269650 10.0kb downstream 10.0kb downstream 12973 true chromosome_6: 2597939-2610911 Chlamydomonas reinhardtii
Cre06.g269650 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 2597939-2607938 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111785 5260 Chlorophyte View MSA
123429164 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.667       Low
cufflinks 47.654     High  
cufflinks 128.151     High  
cufflinks 112.946     High  
cufflinks 41.875     High  
cufflinks 48.236     High  
cufflinks 92.134     High  
cufflinks 78.262     High  
cufflinks 2.079       Low
cufflinks 18.467     High  
cufflinks 158.392     High High
cufflinks 70.057     High  
cufflinks 39.352     High  
cufflinks 47.624     High  
cufflinks 76.279     High  
cufflinks 2.131       Low
cufflinks 6.89       Low
cufflinks 76.65     High  
cufflinks 40.055     High  
cufflinks 98.769     High  
cufflinks 66.033     High  
cufflinks 4.151       Low
cufflinks 74.583     High  
cufflinks 90.401     High  
cufflinks 2.424       Low
cufflinks 44.3378 0.0 88.9589 High High
cufflinks 31.9105 8.03793 55.7831 High Low
cufflinks 28.3397 0.0 57.4179 High  
cufflinks 77.019 0.0 157.294 High High
cufflinks 80.2048 5.62418 154.785 High  

0 Strain