Gene : Cre06.g273413 C. reinhardtii v5.6
Defline:  (1 of 1) K14835 - ribosomal RNA methyltransferase Nop2 [EC:2.1.1.-] (NOP2) Genomic Order:  555
Name:  ? Cre06.g273413 Secondary Identifier:  ? PAC:30779691
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g273413 0.5kb upstream 0.5kb upstream 7892 true chromosome_6: 2985157-2993048 Chlamydomonas reinhardtii
Cre06.g273413 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 2985157-2985656 Chlamydomonas reinhardtii
Cre06.g273413 0.5kb downstream 0.5kb downstream 7892 true chromosome_6: 2985657-2993548 Chlamydomonas reinhardtii
Cre06.g273413 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 2993049-2993548 Chlamydomonas reinhardtii
Cre06.g273413 1.0kb upstream 1.0kb upstream 8392 true chromosome_6: 2984657-2993048 Chlamydomonas reinhardtii
Cre06.g273413 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 2984657-2985656 Chlamydomonas reinhardtii
Cre06.g273413 1.0kb downstream 1.0kb downstream 8392 true chromosome_6: 2985657-2994048 Chlamydomonas reinhardtii
Cre06.g273413 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 2993049-2994048 Chlamydomonas reinhardtii
Cre06.g273413 2.0kb upstream 2.0kb upstream 9392 true chromosome_6: 2983657-2993048 Chlamydomonas reinhardtii
Cre06.g273413 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 2983657-2985656 Chlamydomonas reinhardtii
Cre06.g273413 2.0kb downstream 2.0kb downstream 9392 true chromosome_6: 2985657-2995048 Chlamydomonas reinhardtii
Cre06.g273413 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 2993049-2995048 Chlamydomonas reinhardtii
Cre06.g273413 5.0kb upstream 5.0kb upstream 12392 true chromosome_6: 2980657-2993048 Chlamydomonas reinhardtii
Cre06.g273413 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 2980657-2985656 Chlamydomonas reinhardtii
Cre06.g273413 5.0kb downstream 5.0kb downstream 12392 true chromosome_6: 2985657-2998048 Chlamydomonas reinhardtii
Cre06.g273413 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 2993049-2998048 Chlamydomonas reinhardtii
Cre06.g273413 10.0kb upstream 10.0kb upstream 17392 true chromosome_6: 2975657-2993048 Chlamydomonas reinhardtii
Cre06.g273413 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 2975657-2985656 Chlamydomonas reinhardtii
Cre06.g273413 10.0kb downstream 10.0kb downstream 17392 true chromosome_6: 2985657-3003048 Chlamydomonas reinhardtii
Cre06.g273413 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 2993049-3003048 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112600 5260 Chlorophyte View MSA
123427921 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.622        
cufflinks 5.392        
cufflinks 2.559        
cufflinks 3.635        
cufflinks 4.244        
cufflinks 3.683        
cufflinks 5.064        
cufflinks 2.802        
cufflinks 1.682        
cufflinks 1.113        
cufflinks 5.668        
cufflinks 4.183        
cufflinks 0.892        
cufflinks 4.043        
cufflinks 2.575        
cufflinks 3.25        
cufflinks 0.04     Low Low
cufflinks 2.463        
cufflinks 1.097        
cufflinks 4.299        
cufflinks 3.622        
cufflinks 0.393       Low
cufflinks 4.604        
cufflinks 2.984        
cufflinks 0.087     Low Low
cufflinks 25.6783 0.0 51.9367   High
cufflinks 26.5238 5.91213 47.1355    
cufflinks 0.526477 0.0 1.3093   Low
cufflinks 9.84336 0.710389 18.9763   Low
cufflinks 31.1421 2.49153 59.7927 High High

0 Strain