Gene : Cre06.g301000 C. reinhardtii v5.6
Defline:  (1 of 268) PTHR23257 - SERINE-THREONINE PROTEIN KINASE Genomic Order:  1347
Name:  ? Cre06.g301000 Secondary Identifier:  ? PAC:30778863
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g301000 0.5kb upstream 0.5kb upstream 6863 true chromosome_6: 7580640-7587502 Chlamydomonas reinhardtii
Cre06.g301000 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 7580640-7581139 Chlamydomonas reinhardtii
Cre06.g301000 0.5kb downstream 0.5kb downstream 6863 true chromosome_6: 7581140-7588002 Chlamydomonas reinhardtii
Cre06.g301000 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 7587503-7588002 Chlamydomonas reinhardtii
Cre06.g301000 1.0kb upstream 1.0kb upstream 7363 true chromosome_6: 7580140-7587502 Chlamydomonas reinhardtii
Cre06.g301000 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 7580140-7581139 Chlamydomonas reinhardtii
Cre06.g301000 1.0kb downstream 1.0kb downstream 7363 true chromosome_6: 7581140-7588502 Chlamydomonas reinhardtii
Cre06.g301000 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 7587503-7588502 Chlamydomonas reinhardtii
Cre06.g301000 2.0kb upstream 2.0kb upstream 8363 true chromosome_6: 7579140-7587502 Chlamydomonas reinhardtii
Cre06.g301000 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 7579140-7581139 Chlamydomonas reinhardtii
Cre06.g301000 2.0kb downstream 2.0kb downstream 8363 true chromosome_6: 7581140-7589502 Chlamydomonas reinhardtii
Cre06.g301000 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 7587503-7589502 Chlamydomonas reinhardtii
Cre06.g301000 5.0kb upstream 5.0kb upstream 11363 true chromosome_6: 7576140-7587502 Chlamydomonas reinhardtii
Cre06.g301000 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 7576140-7581139 Chlamydomonas reinhardtii
Cre06.g301000 5.0kb downstream 5.0kb downstream 11363 true chromosome_6: 7581140-7592502 Chlamydomonas reinhardtii
Cre06.g301000 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 7587503-7592502 Chlamydomonas reinhardtii
Cre06.g301000 10.0kb upstream 10.0kb upstream 16363 true chromosome_6: 7571140-7587502 Chlamydomonas reinhardtii
Cre06.g301000 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 7571140-7581139 Chlamydomonas reinhardtii
Cre06.g301000 10.0kb downstream 10.0kb downstream 16363 true chromosome_6: 7581140-7597502 Chlamydomonas reinhardtii
Cre06.g301000 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 7587503-7597502 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098870 5260 Chlorophyte View MSA
123429169 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.934       Low
cufflinks 2.136        
cufflinks 7.41       High
cufflinks 7.201       High
cufflinks 1.86        
cufflinks 2.406        
cufflinks 3.594        
cufflinks 4.206        
cufflinks 1.267       Low
cufflinks 1.271       Low
cufflinks 8.451       High
cufflinks 4.378        
cufflinks 1.695        
cufflinks 2.696        
cufflinks 3.871        
cufflinks 1.291       Low
cufflinks 2.042        
cufflinks 4.927        
cufflinks 1.428        
cufflinks 4.325        
cufflinks 3.521        
cufflinks 1.113       Low
cufflinks 4.614        
cufflinks 4.514        
cufflinks 1.063       Low
cufflinks 1.45538 0.165014 2.74574    
cufflinks 2.90412 0.625452 5.18278   Low
cufflinks 3.88888 0.0 7.88781    
cufflinks 4.80521 0.697986 8.91243    
cufflinks 5.71476 1.1467 10.2828    

0 Strain