Gene : Cre06.g305650 C. reinhardtii v5.6
Defline:  (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase Genomic Order:  1456
Name:  ? Cre06.g305650 Secondary Identifier:  ? PAC:30779009
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6927 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g305650 0.5kb upstream 0.5kb upstream 7241 true chromosome_6: 8215405-8222645 Chlamydomonas reinhardtii
Cre06.g305650 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 8215405-8215904 Chlamydomonas reinhardtii
Cre06.g305650 0.5kb downstream 0.5kb downstream 7241 true chromosome_6: 8215905-8223145 Chlamydomonas reinhardtii
Cre06.g305650 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 8222646-8223145 Chlamydomonas reinhardtii
Cre06.g305650 1.0kb upstream 1.0kb upstream 7741 true chromosome_6: 8214905-8222645 Chlamydomonas reinhardtii
Cre06.g305650 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 8214905-8215904 Chlamydomonas reinhardtii
Cre06.g305650 1.0kb downstream 1.0kb downstream 7741 true chromosome_6: 8215905-8223645 Chlamydomonas reinhardtii
Cre06.g305650 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 8222646-8223645 Chlamydomonas reinhardtii
Cre06.g305650 2.0kb upstream 2.0kb upstream 8741 true chromosome_6: 8213905-8222645 Chlamydomonas reinhardtii
Cre06.g305650 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 8213905-8215904 Chlamydomonas reinhardtii
Cre06.g305650 2.0kb downstream 2.0kb downstream 8741 true chromosome_6: 8215905-8224645 Chlamydomonas reinhardtii
Cre06.g305650 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 8222646-8224645 Chlamydomonas reinhardtii
Cre06.g305650 5.0kb upstream 5.0kb upstream 11741 true chromosome_6: 8210905-8222645 Chlamydomonas reinhardtii
Cre06.g305650 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 8210905-8215904 Chlamydomonas reinhardtii
Cre06.g305650 5.0kb downstream 5.0kb downstream 11741 true chromosome_6: 8215905-8227645 Chlamydomonas reinhardtii
Cre06.g305650 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 8222646-8227645 Chlamydomonas reinhardtii
Cre06.g305650 10.0kb upstream 10.0kb upstream 16741 true chromosome_6: 8205905-8222645 Chlamydomonas reinhardtii
Cre06.g305650 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 8205905-8215904 Chlamydomonas reinhardtii
Cre06.g305650 10.0kb downstream 10.0kb downstream 16741 true chromosome_6: 8215905-8232645 Chlamydomonas reinhardtii
Cre06.g305650 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 8222646-8232645 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113463 5260 Chlorophyte View MSA
123429167 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.034       Low
cufflinks 2.084        
cufflinks 2.285        
cufflinks 3.986       High
cufflinks 1.981        
cufflinks 1.937        
cufflinks 2.486        
cufflinks 4.283       High
cufflinks 1.241        
cufflinks 0.463       Low
cufflinks 5.868       High
cufflinks 4.083       High
cufflinks 1.399        
cufflinks 2.216        
cufflinks 3.353        
cufflinks 1.258        
cufflinks 2.169        
cufflinks 2.271        
cufflinks 1.066       Low
cufflinks 2.991        
cufflinks 3.395        
cufflinks 1.691        
cufflinks 1.749        
cufflinks 5.138       High
cufflinks 2.348        
cufflinks 1.9331 0.193693 3.67251   High
cufflinks 7.72333 2.00466 13.442    
cufflinks 2.47841 0.0 5.45072    
cufflinks 2.65535 0.364469 4.94623   High
cufflinks 5.93066 1.17682 10.6845   Low

0 Strain