Gene : RPS4 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g308250 Defline:  (1 of 1) K02987 - small subunit ribosomal protein S4e (RP-S4e, RPS4)
Genomic Order:  1516 Name:  ? Cre06.g308250
Secondary Identifier:  ? PAC:30778562
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g308250 0.5kb upstream 0.5kb upstream 4126 true chromosome_6: 8544180-8548305 Chlamydomonas reinhardtii
Cre06.g308250 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 8547806-8548305 Chlamydomonas reinhardtii
Cre06.g308250 0.5kb downstream 0.5kb downstream 4126 true chromosome_6: 8543680-8547805 Chlamydomonas reinhardtii
Cre06.g308250 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 8543680-8544179 Chlamydomonas reinhardtii
Cre06.g308250 1.0kb upstream 1.0kb upstream 4626 true chromosome_6: 8544180-8548805 Chlamydomonas reinhardtii
Cre06.g308250 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 8547806-8548805 Chlamydomonas reinhardtii
Cre06.g308250 1.0kb downstream 1.0kb downstream 4626 true chromosome_6: 8543180-8547805 Chlamydomonas reinhardtii
Cre06.g308250 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 8543180-8544179 Chlamydomonas reinhardtii
Cre06.g308250 2.0kb upstream 2.0kb upstream 5626 true chromosome_6: 8544180-8549805 Chlamydomonas reinhardtii
Cre06.g308250 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 8547806-8549805 Chlamydomonas reinhardtii
Cre06.g308250 2.0kb downstream 2.0kb downstream 5626 true chromosome_6: 8542180-8547805 Chlamydomonas reinhardtii
Cre06.g308250 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 8542180-8544179 Chlamydomonas reinhardtii
Cre06.g308250 5.0kb upstream 5.0kb upstream 8626 true chromosome_6: 8544180-8552805 Chlamydomonas reinhardtii
Cre06.g308250 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 8547806-8552805 Chlamydomonas reinhardtii
Cre06.g308250 5.0kb downstream 5.0kb downstream 8626 true chromosome_6: 8539180-8547805 Chlamydomonas reinhardtii
Cre06.g308250 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 8539180-8544179 Chlamydomonas reinhardtii
Cre06.g308250 10.0kb upstream 10.0kb upstream 13626 true chromosome_6: 8544180-8557805 Chlamydomonas reinhardtii
Cre06.g308250 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 8547806-8557805 Chlamydomonas reinhardtii
Cre06.g308250 10.0kb downstream 10.0kb downstream 13626 true chromosome_6: 8534180-8547805 Chlamydomonas reinhardtii
Cre06.g308250 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 8534180-8544179 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110008 5260 Chlorophyte View MSA
123426872 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1093.69     High  
cufflinks 761.704     High  
cufflinks 698.519     High Low
cufflinks 853.381     High  
cufflinks 803.562     High  
cufflinks 818.368     High  
cufflinks 1167.07     High High
cufflinks 898.847     High  
cufflinks 784.664     High  
cufflinks 640.84     High Low
cufflinks 992.668     High  
cufflinks 1071.16     High  
cufflinks 727.828     High Low
cufflinks 777.117     High  
cufflinks 1006.09     High  
cufflinks 929.503     High  
cufflinks 1158.74     High High
cufflinks 687.384     High Low
cufflinks 1157.38     High High
cufflinks 1408.52     High High
cufflinks 963.057     High  
cufflinks 1058.15     High  
cufflinks 1056.61     High  
cufflinks 1103.2     High  
cufflinks 1123.97     High  
cufflinks 5078.51 1994.24 8162.79 High  
cufflinks 2280.89 154.547 4407.23 High  
cufflinks 2959.13 0.0 6325.64 High  
cufflinks 4035.58 1360.27 6710.9 High  
cufflinks 1727.97 60.6012 3395.34 High Low

0 Strain