Gene : HEL28 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g289950 Defline:  (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2)
Genomic Order:  1114 Name:  ? Cre06.g289950
Secondary Identifier:  ? PAC:30779809
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g289950 0.5kb upstream 0.5kb upstream 13737 true chromosome_6: 6107729-6121465 Chlamydomonas reinhardtii
Cre06.g289950 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 6120966-6121465 Chlamydomonas reinhardtii
Cre06.g289950 0.5kb downstream 0.5kb downstream 13737 true chromosome_6: 6107229-6120965 Chlamydomonas reinhardtii
Cre06.g289950 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 6107229-6107728 Chlamydomonas reinhardtii
Cre06.g289950 1.0kb upstream 1.0kb upstream 14237 true chromosome_6: 6107729-6121965 Chlamydomonas reinhardtii
Cre06.g289950 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 6120966-6121965 Chlamydomonas reinhardtii
Cre06.g289950 1.0kb downstream 1.0kb downstream 14237 true chromosome_6: 6106729-6120965 Chlamydomonas reinhardtii
Cre06.g289950 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 6106729-6107728 Chlamydomonas reinhardtii
Cre06.g289950 2.0kb upstream 2.0kb upstream 15237 true chromosome_6: 6107729-6122965 Chlamydomonas reinhardtii
Cre06.g289950 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 6120966-6122965 Chlamydomonas reinhardtii
Cre06.g289950 2.0kb downstream 2.0kb downstream 15237 true chromosome_6: 6105729-6120965 Chlamydomonas reinhardtii
Cre06.g289950 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 6105729-6107728 Chlamydomonas reinhardtii
Cre06.g289950 5.0kb upstream 5.0kb upstream 18237 true chromosome_6: 6107729-6125965 Chlamydomonas reinhardtii
Cre06.g289950 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 6120966-6125965 Chlamydomonas reinhardtii
Cre06.g289950 5.0kb downstream 5.0kb downstream 18237 true chromosome_6: 6102729-6120965 Chlamydomonas reinhardtii
Cre06.g289950 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 6102729-6107728 Chlamydomonas reinhardtii
Cre06.g289950 10.0kb upstream 10.0kb upstream 23237 true chromosome_6: 6107729-6130965 Chlamydomonas reinhardtii
Cre06.g289950 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 6120966-6130965 Chlamydomonas reinhardtii
Cre06.g289950 10.0kb downstream 10.0kb downstream 23237 true chromosome_6: 6097729-6120965 Chlamydomonas reinhardtii
Cre06.g289950 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 6097729-6107728 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108560 5260 Chlorophyte View MSA
123425056 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.772        
cufflinks 1.345        
cufflinks 1.29        
cufflinks 1.418        
cufflinks 0.974        
cufflinks 1.049        
cufflinks 1.028        
cufflinks 1.534        
cufflinks 0.931        
cufflinks 0.219       Low
cufflinks 1.45        
cufflinks 1.27        
cufflinks 0.496       Low
cufflinks 1.008        
cufflinks 1.033        
cufflinks 1.141        
cufflinks 0.506       Low
cufflinks 1.187        
cufflinks 0.219       Low
cufflinks 1.287        
cufflinks 0.998        
cufflinks 0.735        
cufflinks 1.395        
cufflinks 1.525        
cufflinks 0.659        
cufflinks 5.95893 0.67145 11.2464   Low
cufflinks 7.84856 2.14351 13.5536   High
cufflinks 1.33464 0.0 2.95357   Low
cufflinks 4.53694 0.634658 8.43922   Low
cufflinks 6.64308 1.28404 12.0021    

0 Strain