Gene : CHI5 C. reinhardtii v5.6
Primary Identifier:  ? Cre07.g317250 Defline:  (1 of 2) K01183 - chitinase (E3.2.1.14)
Genomic Order:  111 Name:  ? Cre07.g317250
Secondary Identifier:  ? PAC:30774850
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6902 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g317250 0.5kb upstream 0.5kb upstream 6825 true chromosome_7: 659706-666530 Chlamydomonas reinhardtii
Cre07.g317250 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 666031-666530 Chlamydomonas reinhardtii
Cre07.g317250 0.5kb downstream 0.5kb downstream 6825 true chromosome_7: 659206-666030 Chlamydomonas reinhardtii
Cre07.g317250 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 659206-659705 Chlamydomonas reinhardtii
Cre07.g317250 1.0kb upstream 1.0kb upstream 7325 true chromosome_7: 659706-667030 Chlamydomonas reinhardtii
Cre07.g317250 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 666031-667030 Chlamydomonas reinhardtii
Cre07.g317250 1.0kb downstream 1.0kb downstream 7325 true chromosome_7: 658706-666030 Chlamydomonas reinhardtii
Cre07.g317250 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 658706-659705 Chlamydomonas reinhardtii
Cre07.g317250 2.0kb upstream 2.0kb upstream 8325 true chromosome_7: 659706-668030 Chlamydomonas reinhardtii
Cre07.g317250 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 666031-668030 Chlamydomonas reinhardtii
Cre07.g317250 2.0kb downstream 2.0kb downstream 8325 true chromosome_7: 657706-666030 Chlamydomonas reinhardtii
Cre07.g317250 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 657706-659705 Chlamydomonas reinhardtii
Cre07.g317250 5.0kb upstream 5.0kb upstream 11325 true chromosome_7: 659706-671030 Chlamydomonas reinhardtii
Cre07.g317250 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 666031-671030 Chlamydomonas reinhardtii
Cre07.g317250 5.0kb downstream 5.0kb downstream 11325 true chromosome_7: 654706-666030 Chlamydomonas reinhardtii
Cre07.g317250 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 654706-659705 Chlamydomonas reinhardtii
Cre07.g317250 10.0kb upstream 10.0kb upstream 16325 true chromosome_7: 659706-676030 Chlamydomonas reinhardtii
Cre07.g317250 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 666031-676030 Chlamydomonas reinhardtii
Cre07.g317250 10.0kb downstream 10.0kb downstream 16325 true chromosome_7: 649706-666030 Chlamydomonas reinhardtii
Cre07.g317250 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 649706-659705 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076368 5260 Chlorophyte Singleton cluster - no MSA
123394471 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.739        
cufflinks 6.786        
cufflinks 9.285       High
cufflinks 10.736       High
cufflinks 3.48        
cufflinks 6.394        
cufflinks 3.952        
cufflinks 5.697        
cufflinks 3.782        
cufflinks 2.868        
cufflinks 16.113     High High
cufflinks 6.247        
cufflinks 1.166       Low
cufflinks 7.532        
cufflinks 6.743        
cufflinks 9.661       High
cufflinks 5.696        
cufflinks 4.825        
cufflinks 1.208       Low
cufflinks 4.235        
cufflinks 6.085        
cufflinks 5.475        
cufflinks 3.083        
cufflinks 6.494        
cufflinks 3.195        
cufflinks 5.24832 0.80799 9.68865   Low
cufflinks 10.3025 2.81216 17.7927    
cufflinks 9.0822 0.0 18.2511    
cufflinks 2.31489 0.341103 4.28868   Low
cufflinks 7.16164 1.40978 12.9135    

0 Strain