Gene : Cre08.g358552 C. reinhardtii v5.6
Genomic Order:  40 Name:  ? Cre08.g358552
Secondary Identifier:  ? PAC:30774098
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g358552 0.5kb upstream 0.5kb upstream 7882 true chromosome_8: 235460-243341 Chlamydomonas reinhardtii
Cre08.g358552 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 235460-235959 Chlamydomonas reinhardtii
Cre08.g358552 0.5kb downstream 0.5kb downstream 7882 true chromosome_8: 235960-243841 Chlamydomonas reinhardtii
Cre08.g358552 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 243342-243841 Chlamydomonas reinhardtii
Cre08.g358552 1.0kb upstream 1.0kb upstream 8382 true chromosome_8: 234960-243341 Chlamydomonas reinhardtii
Cre08.g358552 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 234960-235959 Chlamydomonas reinhardtii
Cre08.g358552 1.0kb downstream 1.0kb downstream 8382 true chromosome_8: 235960-244341 Chlamydomonas reinhardtii
Cre08.g358552 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 243342-244341 Chlamydomonas reinhardtii
Cre08.g358552 2.0kb upstream 2.0kb upstream 9382 true chromosome_8: 233960-243341 Chlamydomonas reinhardtii
Cre08.g358552 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 233960-235959 Chlamydomonas reinhardtii
Cre08.g358552 2.0kb downstream 2.0kb downstream 9382 true chromosome_8: 235960-245341 Chlamydomonas reinhardtii
Cre08.g358552 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 243342-245341 Chlamydomonas reinhardtii
Cre08.g358552 5.0kb upstream 5.0kb upstream 12382 true chromosome_8: 230960-243341 Chlamydomonas reinhardtii
Cre08.g358552 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 230960-235959 Chlamydomonas reinhardtii
Cre08.g358552 5.0kb downstream 5.0kb downstream 12382 true chromosome_8: 235960-248341 Chlamydomonas reinhardtii
Cre08.g358552 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 243342-248341 Chlamydomonas reinhardtii
Cre08.g358552 10.0kb upstream 10.0kb upstream 17382 true chromosome_8: 225960-243341 Chlamydomonas reinhardtii
Cre08.g358552 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 225960-235959 Chlamydomonas reinhardtii
Cre08.g358552 10.0kb downstream 10.0kb downstream 17382 true chromosome_8: 235960-253341 Chlamydomonas reinhardtii
Cre08.g358552 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 243342-253341 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098653 5260 Chlorophyte View MSA
123424198 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.267       Low
cufflinks 0.725        
cufflinks 1.27        
cufflinks 2.519       High
cufflinks 0.706        
cufflinks 0.783        
cufflinks 0.851        
cufflinks 2.258       High
cufflinks 0.398       Low
cufflinks 0.203       Low
cufflinks 2.164       High
cufflinks 1.688        
cufflinks 0.715        
cufflinks 0.674        
cufflinks 1.334        
cufflinks 0.493        
cufflinks 1.676        
cufflinks 1.381        
cufflinks 0.094       Low
cufflinks 1.175        
cufflinks 1.227        
cufflinks 0.905        
cufflinks 1.07        
cufflinks 2.59       High
cufflinks 1.547        
cufflinks 1.1046 0.0 2.21352   Low
cufflinks 9.04933 2.37752 15.7211    
cufflinks 11.8558 0.0 23.8392   High
cufflinks 5.15375 0.873552 9.43394    
cufflinks 6.13411 1.13749 11.1307    

0 Strain