Gene : Cre07.g352300 C. reinhardtii v5.6
Defline:  (1 of 3) 2.1.1.200 - tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase / TrMet(Xm32) Genomic Order:  945
Name:  ? Cre07.g352300 Secondary Identifier:  ? PAC:30774901
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g352300 0.5kb upstream 0.5kb upstream 3832 true chromosome_7: 5656153-5659984 Chlamydomonas reinhardtii
Cre07.g352300 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 5656153-5656652 Chlamydomonas reinhardtii
Cre07.g352300 0.5kb downstream 0.5kb downstream 3832 true chromosome_7: 5656653-5660484 Chlamydomonas reinhardtii
Cre07.g352300 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 5659985-5660484 Chlamydomonas reinhardtii
Cre07.g352300 1.0kb upstream 1.0kb upstream 4332 true chromosome_7: 5655653-5659984 Chlamydomonas reinhardtii
Cre07.g352300 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 5655653-5656652 Chlamydomonas reinhardtii
Cre07.g352300 1.0kb downstream 1.0kb downstream 4332 true chromosome_7: 5656653-5660984 Chlamydomonas reinhardtii
Cre07.g352300 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 5659985-5660984 Chlamydomonas reinhardtii
Cre07.g352300 2.0kb upstream 2.0kb upstream 5332 true chromosome_7: 5654653-5659984 Chlamydomonas reinhardtii
Cre07.g352300 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 5654653-5656652 Chlamydomonas reinhardtii
Cre07.g352300 2.0kb downstream 2.0kb downstream 5332 true chromosome_7: 5656653-5661984 Chlamydomonas reinhardtii
Cre07.g352300 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 5659985-5661984 Chlamydomonas reinhardtii
Cre07.g352300 5.0kb upstream 5.0kb upstream 8332 true chromosome_7: 5651653-5659984 Chlamydomonas reinhardtii
Cre07.g352300 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 5651653-5656652 Chlamydomonas reinhardtii
Cre07.g352300 5.0kb downstream 5.0kb downstream 8332 true chromosome_7: 5656653-5664984 Chlamydomonas reinhardtii
Cre07.g352300 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 5659985-5664984 Chlamydomonas reinhardtii
Cre07.g352300 10.0kb upstream 10.0kb upstream 13332 true chromosome_7: 5646653-5659984 Chlamydomonas reinhardtii
Cre07.g352300 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 5646653-5656652 Chlamydomonas reinhardtii
Cre07.g352300 10.0kb downstream 10.0kb downstream 13332 true chromosome_7: 5656653-5669984 Chlamydomonas reinhardtii
Cre07.g352300 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 5659985-5669984 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111021 5260 Chlorophyte View MSA
123423200 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.123        
cufflinks 2.744       High
cufflinks 1.054        
cufflinks 1.18        
cufflinks 1.522        
cufflinks 2.105        
cufflinks 0.736       Low
cufflinks 1.733        
cufflinks 2.104        
cufflinks 1.484        
cufflinks 1.246        
cufflinks 1.444        
cufflinks 1.909        
cufflinks 1.621        
cufflinks 1.606        
cufflinks 3.306       High
cufflinks 0.977        
cufflinks 1.07        
cufflinks 0.206       Low
cufflinks 0.323       Low
cufflinks 1.781        
cufflinks 1.624        
cufflinks 1.28        
cufflinks 2.134        
cufflinks 1.377        
cufflinks 7.27384 1.16337 13.3843   High
cufflinks 8.56095 1.31484 15.8071    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.03768 0.392475 7.68289    
cufflinks 7.86051 1.17161 14.5494    

0 Strain