Gene : Cre09.g387393 C. reinhardtii v5.6
Defline:  (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2) Genomic Order:  486
Name:  ? Cre09.g387393 Secondary Identifier:  ? PAC:30780858
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g387393 0.5kb upstream 0.5kb upstream 6740 true chromosome_9: 3193010-3199749 Chlamydomonas reinhardtii
Cre09.g387393 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 3199250-3199749 Chlamydomonas reinhardtii
Cre09.g387393 0.5kb downstream 0.5kb downstream 6740 true chromosome_9: 3192510-3199249 Chlamydomonas reinhardtii
Cre09.g387393 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 3192510-3193009 Chlamydomonas reinhardtii
Cre09.g387393 1.0kb upstream 1.0kb upstream 7240 true chromosome_9: 3193010-3200249 Chlamydomonas reinhardtii
Cre09.g387393 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 3199250-3200249 Chlamydomonas reinhardtii
Cre09.g387393 1.0kb downstream 1.0kb downstream 7240 true chromosome_9: 3192010-3199249 Chlamydomonas reinhardtii
Cre09.g387393 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 3192010-3193009 Chlamydomonas reinhardtii
Cre09.g387393 2.0kb upstream 2.0kb upstream 8240 true chromosome_9: 3193010-3201249 Chlamydomonas reinhardtii
Cre09.g387393 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 3199250-3201249 Chlamydomonas reinhardtii
Cre09.g387393 2.0kb downstream 2.0kb downstream 8240 true chromosome_9: 3191010-3199249 Chlamydomonas reinhardtii
Cre09.g387393 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 3191010-3193009 Chlamydomonas reinhardtii
Cre09.g387393 5.0kb upstream 5.0kb upstream 11240 true chromosome_9: 3193010-3204249 Chlamydomonas reinhardtii
Cre09.g387393 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 3199250-3204249 Chlamydomonas reinhardtii
Cre09.g387393 5.0kb downstream 5.0kb downstream 11240 true chromosome_9: 3188010-3199249 Chlamydomonas reinhardtii
Cre09.g387393 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 3188010-3193009 Chlamydomonas reinhardtii
Cre09.g387393 10.0kb upstream 10.0kb upstream 16240 true chromosome_9: 3193010-3209249 Chlamydomonas reinhardtii
Cre09.g387393 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 3199250-3209249 Chlamydomonas reinhardtii
Cre09.g387393 10.0kb downstream 10.0kb downstream 16240 true chromosome_9: 3183010-3199249 Chlamydomonas reinhardtii
Cre09.g387393 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 3183010-3193009 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111858 5260 Chlorophyte View MSA
123429001 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.552        
cufflinks 7.254        
cufflinks 7.87        
cufflinks 7.44        
cufflinks 6.334        
cufflinks 6.796        
cufflinks 7.421        
cufflinks 8.678       High
cufflinks 4.09        
cufflinks 1.99       Low
cufflinks 6.434        
cufflinks 6.455        
cufflinks 4.924        
cufflinks 6.436        
cufflinks 5.131        
cufflinks 6.066        
cufflinks 3.994        
cufflinks 6.267        
cufflinks 1.528       Low
cufflinks 5.34        
cufflinks 5.156        
cufflinks 3.778        
cufflinks 6.117        
cufflinks 7.045        
cufflinks 4.025        
cufflinks 20.8031 1.09813 40.5081   High
cufflinks 17.4624 4.69687 30.228    
cufflinks 15.1447 0.0 30.4675   Low
cufflinks 13.0322 1.27866 24.7858   Low
cufflinks 19.6186 3.32721 35.9099   High

0 Strain