Gene : PSBO C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g396213 Defline:  (1 of 1) K02716 - photosystem II oxygen-evolving enhancer protein 1 (psbO)
Genomic Order:  724 Name:  ? Cre09.g396213
Secondary Identifier:  ? PAC:30780284
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g396213 0.5kb upstream 0.5kb upstream 2890 true chromosome_9: 4556280-4559169 Chlamydomonas reinhardtii
Cre09.g396213 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 4556280-4556779 Chlamydomonas reinhardtii
Cre09.g396213 0.5kb downstream 0.5kb downstream 2890 true chromosome_9: 4556780-4559669 Chlamydomonas reinhardtii
Cre09.g396213 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 4559170-4559669 Chlamydomonas reinhardtii
Cre09.g396213 1.0kb upstream 1.0kb upstream 3390 true chromosome_9: 4555780-4559169 Chlamydomonas reinhardtii
Cre09.g396213 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 4555780-4556779 Chlamydomonas reinhardtii
Cre09.g396213 1.0kb downstream 1.0kb downstream 3390 true chromosome_9: 4556780-4560169 Chlamydomonas reinhardtii
Cre09.g396213 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 4559170-4560169 Chlamydomonas reinhardtii
Cre09.g396213 2.0kb upstream 2.0kb upstream 4390 true chromosome_9: 4554780-4559169 Chlamydomonas reinhardtii
Cre09.g396213 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 4554780-4556779 Chlamydomonas reinhardtii
Cre09.g396213 2.0kb downstream 2.0kb downstream 4390 true chromosome_9: 4556780-4561169 Chlamydomonas reinhardtii
Cre09.g396213 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 4559170-4561169 Chlamydomonas reinhardtii
Cre09.g396213 5.0kb upstream 5.0kb upstream 7390 true chromosome_9: 4551780-4559169 Chlamydomonas reinhardtii
Cre09.g396213 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 4551780-4556779 Chlamydomonas reinhardtii
Cre09.g396213 5.0kb downstream 5.0kb downstream 7390 true chromosome_9: 4556780-4564169 Chlamydomonas reinhardtii
Cre09.g396213 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 4559170-4564169 Chlamydomonas reinhardtii
Cre09.g396213 10.0kb upstream 10.0kb upstream 12390 true chromosome_9: 4546780-4559169 Chlamydomonas reinhardtii
Cre09.g396213 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 4546780-4556779 Chlamydomonas reinhardtii
Cre09.g396213 10.0kb downstream 10.0kb downstream 12390 true chromosome_9: 4556780-4569169 Chlamydomonas reinhardtii
Cre09.g396213 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 4559170-4569169 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110276 5260 Chlorophyte View MSA
123425295 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2517.94     High High
cufflinks 1936.42     High  
cufflinks 1390.12     High  
cufflinks 1527.37     High  
cufflinks 1728.03     High  
cufflinks 1985.71     High  
cufflinks 812.225     High Low
cufflinks 1830.86     High  
cufflinks 2518.1     High High
cufflinks 1350.82     High  
cufflinks 1150.38     High  
cufflinks 1931.42     High  
cufflinks 1449.06     High  
cufflinks 1961.64     High  
cufflinks 1581.9     High  
cufflinks 2503.65     High High
cufflinks 2762.24     High High
cufflinks 1673.24     High  
cufflinks 935.846     High Low
cufflinks 572.926     High Low
cufflinks 1878.88     High  
cufflinks 2532.87     High High
cufflinks 727.547     High Low
cufflinks 1505.92     High  
cufflinks 2702.32     High High
cufflinks 1066.15 162.866 1969.44 High  
cufflinks 1854.25 76.2565 3632.24 High  
cufflinks 1044.88 0.0 2232.1 High  
cufflinks 1059.54 160.058 1959.01 High  
cufflinks 1514.21 83.0977 2945.32 High  

0 Strain