Gene : Cre09.g397142 C. reinhardtii v5.6
Defline:  (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL Genomic Order:  749
Name:  ? Cre09.g397142 Secondary Identifier:  ? PAC:30780898
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g397142 0.5kb upstream 0.5kb upstream 20351 true chromosome_9: 4724250-4744600 Chlamydomonas reinhardtii
Cre09.g397142 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 4744101-4744600 Chlamydomonas reinhardtii
Cre09.g397142 0.5kb downstream 0.5kb downstream 20351 true chromosome_9: 4723750-4744100 Chlamydomonas reinhardtii
Cre09.g397142 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 4723750-4724249 Chlamydomonas reinhardtii
Cre09.g397142 1.0kb upstream 1.0kb upstream 20851 true chromosome_9: 4724250-4745100 Chlamydomonas reinhardtii
Cre09.g397142 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 4744101-4745100 Chlamydomonas reinhardtii
Cre09.g397142 1.0kb downstream 1.0kb downstream 20851 true chromosome_9: 4723250-4744100 Chlamydomonas reinhardtii
Cre09.g397142 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 4723250-4724249 Chlamydomonas reinhardtii
Cre09.g397142 2.0kb upstream 2.0kb upstream 21851 true chromosome_9: 4724250-4746100 Chlamydomonas reinhardtii
Cre09.g397142 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 4744101-4746100 Chlamydomonas reinhardtii
Cre09.g397142 2.0kb downstream 2.0kb downstream 21851 true chromosome_9: 4722250-4744100 Chlamydomonas reinhardtii
Cre09.g397142 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 4722250-4724249 Chlamydomonas reinhardtii
Cre09.g397142 5.0kb upstream 5.0kb upstream 24851 true chromosome_9: 4724250-4749100 Chlamydomonas reinhardtii
Cre09.g397142 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 4744101-4749100 Chlamydomonas reinhardtii
Cre09.g397142 5.0kb downstream 5.0kb downstream 24851 true chromosome_9: 4719250-4744100 Chlamydomonas reinhardtii
Cre09.g397142 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 4719250-4724249 Chlamydomonas reinhardtii
Cre09.g397142 10.0kb upstream 10.0kb upstream 29851 true chromosome_9: 4724250-4754100 Chlamydomonas reinhardtii
Cre09.g397142 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 4744101-4754100 Chlamydomonas reinhardtii
Cre09.g397142 10.0kb downstream 10.0kb downstream 29851 true chromosome_9: 4714250-4744100 Chlamydomonas reinhardtii
Cre09.g397142 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 4714250-4724249 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078401 5260 Chlorophyte Singleton cluster - no MSA
123396326 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.221       Low
cufflinks 0.579        
cufflinks 0.704        
cufflinks 1.235       High
cufflinks 0.527        
cufflinks 0.471        
cufflinks 0.656        
cufflinks 0.999        
cufflinks 0.231       Low
cufflinks 0.103       Low
cufflinks 1.581       High
cufflinks 0.938        
cufflinks 0.147       Low
cufflinks 0.542        
cufflinks 0.862        
cufflinks 0.331        
cufflinks 0.596        
cufflinks 0.599        
cufflinks 0.193       Low
cufflinks 1.287       High
cufflinks 1.087        
cufflinks 0.506        
cufflinks 0.644        
cufflinks 0.984        
cufflinks 0.652        
cufflinks 1.22902 0.177465 2.28057   High
cufflinks 5.20188 1.41268 8.99109    
cufflinks 2.47979 0.0 5.09016    
cufflinks 4.80864 0.513042 9.10425   High
cufflinks 4.04359 0.810183 7.277   Low

0 Strain