Gene : CTL4 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g400850 Defline:  (1 of 1) PTHR10877//PTHR10877:SF139 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  157 Name:  ? Cre09.g400850
Secondary Identifier:  ? PAC:30780961
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g400850 0.5kb upstream 0.5kb upstream 42628 true chromosome_9: 967371-1009998 Chlamydomonas reinhardtii
Cre09.g400850 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 967371-967870 Chlamydomonas reinhardtii
Cre09.g400850 0.5kb downstream 0.5kb downstream 42628 true chromosome_9: 967871-1010498 Chlamydomonas reinhardtii
Cre09.g400850 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 1009999-1010498 Chlamydomonas reinhardtii
Cre09.g400850 1.0kb upstream 1.0kb upstream 43128 true chromosome_9: 966871-1009998 Chlamydomonas reinhardtii
Cre09.g400850 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 966871-967870 Chlamydomonas reinhardtii
Cre09.g400850 1.0kb downstream 1.0kb downstream 43128 true chromosome_9: 967871-1010998 Chlamydomonas reinhardtii
Cre09.g400850 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 1009999-1010998 Chlamydomonas reinhardtii
Cre09.g400850 2.0kb upstream 2.0kb upstream 44128 true chromosome_9: 965871-1009998 Chlamydomonas reinhardtii
Cre09.g400850 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 965871-967870 Chlamydomonas reinhardtii
Cre09.g400850 2.0kb downstream 2.0kb downstream 44128 true chromosome_9: 967871-1011998 Chlamydomonas reinhardtii
Cre09.g400850 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 1009999-1011998 Chlamydomonas reinhardtii
Cre09.g400850 5.0kb upstream 5.0kb upstream 47128 true chromosome_9: 962871-1009998 Chlamydomonas reinhardtii
Cre09.g400850 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 962871-967870 Chlamydomonas reinhardtii
Cre09.g400850 5.0kb downstream 5.0kb downstream 47128 true chromosome_9: 967871-1014998 Chlamydomonas reinhardtii
Cre09.g400850 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 1009999-1014998 Chlamydomonas reinhardtii
Cre09.g400850 10.0kb upstream 10.0kb upstream 52128 true chromosome_9: 957871-1009998 Chlamydomonas reinhardtii
Cre09.g400850 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 957871-967870 Chlamydomonas reinhardtii
Cre09.g400850 10.0kb downstream 10.0kb downstream 52128 true chromosome_9: 967871-1019998 Chlamydomonas reinhardtii
Cre09.g400850 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 1009999-1019998 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078414 5260 Chlorophyte Singleton cluster - no MSA
123396339 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low Low
cufflinks 0.165     Low  
cufflinks 0.146     Low  
cufflinks 0.152     Low  
cufflinks 0.072     Low  
cufflinks 0.046     Low  
cufflinks 0.188     Low  
cufflinks 0.161     Low  
cufflinks 0.004     Low Low
cufflinks 0.007     Low Low
cufflinks 0.223        
cufflinks 0.173     Low  
cufflinks 0.01     Low Low
cufflinks 0.079     Low  
cufflinks 0.126     Low  
cufflinks 0.012     Low Low
cufflinks 0.097     Low  
cufflinks 0.109     Low  
cufflinks 0.014     Low Low
cufflinks 0.216        
cufflinks 0.117     Low  
cufflinks 0.048     Low  
cufflinks 0.199        
cufflinks 0.167     Low  
cufflinks 0.101     Low  
cufflinks 0.527148 0.0866894 0.967606   High
cufflinks 0.913057 0.176069 1.65004    
cufflinks 0.87337 0.0 1.79371    
cufflinks 0.337827 0.0407653 0.634889   Low
cufflinks 3.56992 0.489947 6.64989   High

0 Strain