Gene : HRP4 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g389900 Defline:  (1 of 1) PTHR15744//PTHR15744:SF0 - BLOM7 // UPF0469 PROTEIN KIAA0907
Genomic Order:  399 Name:  ? Cre09.g389900
Secondary Identifier:  ? PAC:30781027
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g389900 0.5kb upstream 0.5kb upstream 4932 true chromosome_9: 2665170-2670101 Chlamydomonas reinhardtii
Cre09.g389900 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 2665170-2665669 Chlamydomonas reinhardtii
Cre09.g389900 0.5kb downstream 0.5kb downstream 4932 true chromosome_9: 2665670-2670601 Chlamydomonas reinhardtii
Cre09.g389900 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 2670102-2670601 Chlamydomonas reinhardtii
Cre09.g389900 1.0kb upstream 1.0kb upstream 5432 true chromosome_9: 2664670-2670101 Chlamydomonas reinhardtii
Cre09.g389900 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 2664670-2665669 Chlamydomonas reinhardtii
Cre09.g389900 1.0kb downstream 1.0kb downstream 5432 true chromosome_9: 2665670-2671101 Chlamydomonas reinhardtii
Cre09.g389900 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 2670102-2671101 Chlamydomonas reinhardtii
Cre09.g389900 2.0kb upstream 2.0kb upstream 6432 true chromosome_9: 2663670-2670101 Chlamydomonas reinhardtii
Cre09.g389900 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 2663670-2665669 Chlamydomonas reinhardtii
Cre09.g389900 2.0kb downstream 2.0kb downstream 6432 true chromosome_9: 2665670-2672101 Chlamydomonas reinhardtii
Cre09.g389900 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 2670102-2672101 Chlamydomonas reinhardtii
Cre09.g389900 5.0kb upstream 5.0kb upstream 9432 true chromosome_9: 2660670-2670101 Chlamydomonas reinhardtii
Cre09.g389900 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 2660670-2665669 Chlamydomonas reinhardtii
Cre09.g389900 5.0kb downstream 5.0kb downstream 9432 true chromosome_9: 2665670-2675101 Chlamydomonas reinhardtii
Cre09.g389900 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 2670102-2675101 Chlamydomonas reinhardtii
Cre09.g389900 10.0kb upstream 10.0kb upstream 14432 true chromosome_9: 2655670-2670101 Chlamydomonas reinhardtii
Cre09.g389900 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 2655670-2665669 Chlamydomonas reinhardtii
Cre09.g389900 10.0kb downstream 10.0kb downstream 14432 true chromosome_9: 2665670-2680101 Chlamydomonas reinhardtii
Cre09.g389900 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 2670102-2680101 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124097884 5260 Chlorophyte View MSA
123429142 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.123       High
cufflinks 1.911        
cufflinks 4.353       High
cufflinks 1.614       Low
cufflinks 2.638        
cufflinks 3.023        
cufflinks 2.809        
cufflinks 5.178       High
cufflinks 4.195       High
cufflinks 2.564        
cufflinks 0.858       Low
cufflinks 2.468        
cufflinks 3.396        
cufflinks 1.374       Low
cufflinks 2.836        
cufflinks 3.146        
cufflinks 2.747        
cufflinks 1.973        
cufflinks 2.328        
cufflinks 1.485       Low
cufflinks 3.203        
cufflinks 3.151        
cufflinks 3.27        
cufflinks 4.193       High
cufflinks 2.427        
cufflinks 10.7103 1.49147 19.9292   High
cufflinks 9.53989 2.40575 16.674   High
cufflinks 1.91478 0.0 4.51147   Low
cufflinks 4.8719 0.786665 8.95714   Low
cufflinks 7.11616 1.38082 12.8515    

0 Strain