Gene : FAP11 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g390578 Defline:  (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL
Genomic Order:  572 Name:  ? Cre09.g390578
Secondary Identifier:  ? PAC:30781341
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g390578 0.5kb upstream 0.5kb upstream 9916 true chromosome_9: 3658278-3668193 Chlamydomonas reinhardtii
Cre09.g390578 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 3667694-3668193 Chlamydomonas reinhardtii
Cre09.g390578 0.5kb downstream 0.5kb downstream 9916 true chromosome_9: 3657778-3667693 Chlamydomonas reinhardtii
Cre09.g390578 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 3657778-3658277 Chlamydomonas reinhardtii
Cre09.g390578 1.0kb upstream 1.0kb upstream 10416 true chromosome_9: 3658278-3668693 Chlamydomonas reinhardtii
Cre09.g390578 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 3667694-3668693 Chlamydomonas reinhardtii
Cre09.g390578 1.0kb downstream 1.0kb downstream 10416 true chromosome_9: 3657278-3667693 Chlamydomonas reinhardtii
Cre09.g390578 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 3657278-3658277 Chlamydomonas reinhardtii
Cre09.g390578 2.0kb upstream 2.0kb upstream 11416 true chromosome_9: 3658278-3669693 Chlamydomonas reinhardtii
Cre09.g390578 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 3667694-3669693 Chlamydomonas reinhardtii
Cre09.g390578 2.0kb downstream 2.0kb downstream 11416 true chromosome_9: 3656278-3667693 Chlamydomonas reinhardtii
Cre09.g390578 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 3656278-3658277 Chlamydomonas reinhardtii
Cre09.g390578 5.0kb upstream 5.0kb upstream 14416 true chromosome_9: 3658278-3672693 Chlamydomonas reinhardtii
Cre09.g390578 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 3667694-3672693 Chlamydomonas reinhardtii
Cre09.g390578 5.0kb downstream 5.0kb downstream 14416 true chromosome_9: 3653278-3667693 Chlamydomonas reinhardtii
Cre09.g390578 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 3653278-3658277 Chlamydomonas reinhardtii
Cre09.g390578 10.0kb upstream 10.0kb upstream 19416 true chromosome_9: 3658278-3677693 Chlamydomonas reinhardtii
Cre09.g390578 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 3667694-3677693 Chlamydomonas reinhardtii
Cre09.g390578 10.0kb downstream 10.0kb downstream 19416 true chromosome_9: 3648278-3667693 Chlamydomonas reinhardtii
Cre09.g390578 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 3648278-3658277 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081484 5260 Chlorophyte View MSA
123399210 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.615       Low
cufflinks 1.891        
cufflinks 3.77        
cufflinks 6.365       High
cufflinks 1.419        
cufflinks 1.277        
cufflinks 2.113        
cufflinks 3.532        
cufflinks 0.543       Low
cufflinks 0.379       Low
cufflinks 14.157     High High
cufflinks 2.848        
cufflinks 0.83        
cufflinks 1.363        
cufflinks 4.725       High
cufflinks 0.604       Low
cufflinks 1.553        
cufflinks 2.117        
cufflinks 0.546       Low
cufflinks 2.755        
cufflinks 3.818        
cufflinks 1.178        
cufflinks 1.784        
cufflinks 5.227       High
cufflinks 1.292        
cufflinks 0.912801 0.0809462 1.74466   Low
cufflinks 3.84418 0.961073 6.72729   Low
cufflinks 13.4712 0.0 27.3878    
cufflinks 4.03314 0.559676 7.50659    
cufflinks 5.59733 1.09413 10.1005   Low

0 Strain