Gene : Cucsa.160470 C. sativus v1.0
Defline:  (1 of 7) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B Genomic Order:  87
Name:  ? Cucsa.160470 Secondary Identifier:  ? PAC:16965351
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.160470 0.5kb upstream 0.5kb upstream 5974 true scaffold01144: 628912-634885 Cucumis sativus
Cucsa.160470 0.5kb upstream 0.5kb upstream 500 false scaffold01144: 628912-629411 Cucumis sativus
Cucsa.160470 0.5kb downstream 0.5kb downstream 5974 true scaffold01144: 629412-635385 Cucumis sativus
Cucsa.160470 0.5kb downstream 0.5kb downstream 500 false scaffold01144: 634886-635385 Cucumis sativus
Cucsa.160470 1.0kb upstream 1.0kb upstream 6474 true scaffold01144: 628412-634885 Cucumis sativus
Cucsa.160470 1.0kb upstream 1.0kb upstream 1000 false scaffold01144: 628412-629411 Cucumis sativus
Cucsa.160470 1.0kb downstream 1.0kb downstream 6474 true scaffold01144: 629412-635885 Cucumis sativus
Cucsa.160470 1.0kb downstream 1.0kb downstream 1000 false scaffold01144: 634886-635885 Cucumis sativus
Cucsa.160470 2.0kb upstream 2.0kb upstream 7474 true scaffold01144: 627412-634885 Cucumis sativus
Cucsa.160470 2.0kb upstream 2.0kb upstream 2000 false scaffold01144: 627412-629411 Cucumis sativus
Cucsa.160470 2.0kb downstream 2.0kb downstream 7474 true scaffold01144: 629412-636885 Cucumis sativus
Cucsa.160470 2.0kb downstream 2.0kb downstream 2000 false scaffold01144: 634886-636885 Cucumis sativus
Cucsa.160470 5.0kb upstream 5.0kb upstream 10474 true scaffold01144: 624412-634885 Cucumis sativus
Cucsa.160470 5.0kb upstream 5.0kb upstream 5000 false scaffold01144: 624412-629411 Cucumis sativus
Cucsa.160470 5.0kb downstream 5.0kb downstream 10474 true scaffold01144: 629412-639885 Cucumis sativus
Cucsa.160470 5.0kb downstream 5.0kb downstream 5000 false scaffold01144: 634886-639885 Cucumis sativus
Cucsa.160470 10.0kb upstream 10.0kb upstream 15474 true scaffold01144: 619412-634885 Cucumis sativus
Cucsa.160470 10.0kb upstream 10.0kb upstream 10000 false scaffold01144: 619412-629411 Cucumis sativus
Cucsa.160470 10.0kb downstream 10.0kb downstream 15474 true scaffold01144: 629412-644885 Cucumis sativus
Cucsa.160470 10.0kb downstream 10.0kb downstream 10000 false scaffold01144: 634886-644885 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041153 5273 Angiosperm View MSA
122309606 5265 Fabidae View MSA
124067836 5270 Rosid View MSA
123741436 5271 Pentapetalae View MSA
122791943 5272 Eudicot View MSA
121347296 5274 Embryophyte View MSA
123380523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain