Protein Family : rhamnogalacturonate lyase, putative, expressed 123380523

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  146

146 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29596.t000015 (1 of 1) PTHR32018//PTHR32018:SF8 - FAMILY NOT NAMED // RHAMNOGALACTURONATE LYASE-LIKE PROTEIN R. communis v0.1 5773   29596: 116918-122690
29596.t000020 (1 of 3) PTHR32018:SF4 - LG27/30-LIKE GENE R. communis v0.1 4667   29596: 140213-144879
29596.t000019 (1 of 8) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B R. communis v0.1 6178   29596: 133198-139375
29596.t000016 (1 of 8) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B R. communis v0.1 4128   29596: 123708-127835
Cucsa.160470 (1 of 7) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B C. sativus v1.0 5474   scaffold01144: 629412-634885
Cucsa.312070 (1 of 7) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B C. sativus v1.0 7029   scaffold02995: 1560279-1567307
Cucsa.312090 (1 of 1) PTHR32018:SF8 - RHAMNOGALACTURONATE LYASE-LIKE PROTEIN C. sativus v1.0 6641   scaffold02995: 1578184-1584824
orange1.1g005706m.g (1 of 9) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B C. sinensis v1.1 6658   scaffold00004: 2590298-2596955
orange1.1g042458m.g (1 of 9) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B C. sinensis v1.1 4004   scaffold00004: 2585063-2589066
orange1.1g006927m.g (1 of 1) PTHR32018:SF4 - LG27/30-LIKE GENE C. sinensis v1.1 4295   scaffold00004: 2556982-2561276
AT4G24430 (1 of 1) PTHR32018:SF4 - LG27/30-LIKE GENE A. thaliana TAIR10 3058   Chr4: 12630018-12633075
AT1G09910 (1 of 1) PTHR32018//PTHR32018:SF8 - FAMILY NOT NAMED // RHAMNOGALACTURONATE LYASE-LIKE PROTEIN A. thaliana TAIR10 4507   Chr1: 3220035-3224541
AT1G09890 (1 of 2) PTHR32018:SF1 - F21M12.27 PROTEIN-RELATED A. thaliana TAIR10 3302   Chr1: 3214237-3217538
Thhalv10024647m.g (1 of 1) PTHR32018:SF4 - LG27/30-LIKE GENE E. salsugineum v1.0 3170   scaffold_1: 6658368-6661537
Thhalv10007058m.g (1 of 1) PTHR32018:SF8 - RHAMNOGALACTURONATE LYASE-LIKE PROTEIN E. salsugineum v1.0 3803   scaffold_5: 12365324-12369126
Thhalv10007093m.g (1 of 7) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B E. salsugineum v1.0 3673   scaffold_5: 12371649-12375321
Ciclev10000542m.g (1 of 1) PTHR32018:SF4 - LG27/30-LIKE GENE C. clementina v1.0 4113   scaffold_5: 35350024-35354136
Ciclev10003466m.g (1 of 1) PTHR32018:SF8 - RHAMNOGALACTURONATE LYASE-LIKE PROTEIN C. clementina v1.0 6163   scaffold_5: 35313613-35319775
Ciclev10000543m.g (1 of 10) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B C. clementina v1.0 4130   scaffold_5: 35320978-35325107
Lus10028212.g (1 of 17) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B L. usitatissimum v1.0 4085   scaffold327: 581835-585919
Gorai.002G138200 (1 of 10) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B G. raimondii v2.1 4525   Chr02: 23506638-23511162
Gorai.009G227700 (1 of 1) PTHR32018:SF8 - RHAMNOGALACTURONATE LYASE-LIKE PROTEIN G. raimondii v2.1 6357   Chr09: 17855218-17861574
Gorai.009G227800 (1 of 2) PTHR32018:SF4 - LG27/30-LIKE GENE G. raimondii v2.1 4977   Chr09: 17862678-17867654
Gorai.010G032900 (1 of 10) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B G. raimondii v2.1 7141   Chr10: 2951474-2958614
Gorai.010G033000 (1 of 2) PTHR32018:SF4 - LG27/30-LIKE GENE G. raimondii v2.1 5351   Chr10: 2962091-2967441
Thecc1EG034545 (1 of 2) PTHR32018:SF4 - LG27/30-LIKE GENE T. cacao v1.1 3997   scaffold_8: 3577236-3581232
Thecc1EG046890 (1 of 2) PTHR32018:SF4 - LG27/30-LIKE GENE T. cacao v1.1 4785   scaffold_8: 3581952-3586736
Thecc1EG046891 (1 of 5) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B T. cacao v1.1 4615   scaffold_8: 3587388-3592002
Migut.N02843 (1 of 11) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B M. guttatus v2.0 3753   scaffold_14: 23694640-23698392
Migut.C00073 (1 of 1) PTHR32018:SF1 - F21M12.27 PROTEIN-RELATED M. guttatus v2.0 5935   scaffold_3: 2324306-2330240

146 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29596.m000705 R. communis v0.1 123380523 rhamnogalacturonate lyase, putative, expressed 4 5275 Viridiplantae
29596.m000701 R. communis v0.1 123380523 rhamnogalacturonate lyase, putative, expressed 4 5275 Viridiplantae
29596.m000706 R. communis v0.1 123380523 rhamnogalacturonate lyase, putative, expressed 4 5275 Viridiplantae
29596.m000702 R. communis v0.1 123380523 rhamnogalacturonate lyase, putative, expressed 4 5275 Viridiplantae
Cucsa.312070.1 C. sativus v1.0 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
Cucsa.160470.1 C. sativus v1.0 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
Cucsa.312090.1 C. sativus v1.0 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
orange1.1g042458m C. sinensis v1.1 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
orange1.1g005706m C. sinensis v1.1 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
orange1.1g006927m C. sinensis v1.1 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
AT1G09910.1 A. thaliana TAIR10 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
AT4G24430.1 A. thaliana TAIR10 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
AT1G09890.1 A. thaliana TAIR10 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
Thhalv10007058m E. salsugineum v1.0 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
Thhalv10024647m E. salsugineum v1.0 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
Thhalv10007093m E. salsugineum v1.0 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
Ciclev10000543m C. clementina v1.0 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
Ciclev10000542m C. clementina v1.0 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
Ciclev10003466m C. clementina v1.0 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
Lus10028212 L. usitatissimum v1.0 123380523 rhamnogalacturonate lyase, putative, expressed 1 5275 Viridiplantae
Gorai.010G032900.1 G. raimondii v2.1 123380523 rhamnogalacturonate lyase, putative, expressed 5 5275 Viridiplantae
Gorai.002G138200.1 G. raimondii v2.1 123380523 rhamnogalacturonate lyase, putative, expressed 5 5275 Viridiplantae
Gorai.009G227700.1 G. raimondii v2.1 123380523 rhamnogalacturonate lyase, putative, expressed 5 5275 Viridiplantae
Gorai.009G227800.1 G. raimondii v2.1 123380523 rhamnogalacturonate lyase, putative, expressed 5 5275 Viridiplantae
Gorai.010G033000.1 G. raimondii v2.1 123380523 rhamnogalacturonate lyase, putative, expressed 5 5275 Viridiplantae
Thecc1EG046890t1 T. cacao v1.1 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
Thecc1EG034545t1 T. cacao v1.1 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
Thecc1EG046891t1 T. cacao v1.1 123380523 rhamnogalacturonate lyase, putative, expressed 3 5275 Viridiplantae
Migut.N02843.1.p M. guttatus v2.0 123380523 rhamnogalacturonate lyase, putative, expressed 2 5275 Viridiplantae
Migut.C00073.1.p M. guttatus v2.0 123380523 rhamnogalacturonate lyase, putative, expressed 2 5275 Viridiplantae