Gene : Cucsa.312070 C. sativus v1.0
Defline:  (1 of 7) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B Genomic Order:  194
Name:  ? Cucsa.312070 Secondary Identifier:  ? PAC:16976789
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.312070 0.5kb upstream 0.5kb upstream 7529 true scaffold02995: 1560279-1567807 Cucumis sativus
Cucsa.312070 0.5kb upstream 0.5kb upstream 500 false scaffold02995: 1567308-1567807 Cucumis sativus
Cucsa.312070 0.5kb downstream 0.5kb downstream 7529 true scaffold02995: 1559779-1567307 Cucumis sativus
Cucsa.312070 0.5kb downstream 0.5kb downstream 500 false scaffold02995: 1559779-1560278 Cucumis sativus
Cucsa.312070 1.0kb upstream 1.0kb upstream 8029 true scaffold02995: 1560279-1568307 Cucumis sativus
Cucsa.312070 1.0kb upstream 1.0kb upstream 1000 false scaffold02995: 1567308-1568307 Cucumis sativus
Cucsa.312070 1.0kb downstream 1.0kb downstream 8029 true scaffold02995: 1559279-1567307 Cucumis sativus
Cucsa.312070 1.0kb downstream 1.0kb downstream 1000 false scaffold02995: 1559279-1560278 Cucumis sativus
Cucsa.312070 2.0kb upstream 2.0kb upstream 9029 true scaffold02995: 1560279-1569307 Cucumis sativus
Cucsa.312070 2.0kb upstream 2.0kb upstream 2000 false scaffold02995: 1567308-1569307 Cucumis sativus
Cucsa.312070 2.0kb downstream 2.0kb downstream 9029 true scaffold02995: 1558279-1567307 Cucumis sativus
Cucsa.312070 2.0kb downstream 2.0kb downstream 2000 false scaffold02995: 1558279-1560278 Cucumis sativus
Cucsa.312070 5.0kb upstream 5.0kb upstream 12029 true scaffold02995: 1560279-1572307 Cucumis sativus
Cucsa.312070 5.0kb upstream 5.0kb upstream 5000 false scaffold02995: 1567308-1572307 Cucumis sativus
Cucsa.312070 5.0kb downstream 5.0kb downstream 12029 true scaffold02995: 1555279-1567307 Cucumis sativus
Cucsa.312070 5.0kb downstream 5.0kb downstream 5000 false scaffold02995: 1555279-1560278 Cucumis sativus
Cucsa.312070 10.0kb upstream 10.0kb upstream 17029 true scaffold02995: 1560279-1577307 Cucumis sativus
Cucsa.312070 10.0kb upstream 10.0kb upstream 10000 false scaffold02995: 1567308-1577307 Cucumis sativus
Cucsa.312070 10.0kb downstream 10.0kb downstream 17029 true scaffold02995: 1550279-1567307 Cucumis sativus
Cucsa.312070 10.0kb downstream 10.0kb downstream 10000 false scaffold02995: 1550279-1560278 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041153 5273 Angiosperm View MSA
122300396 5265 Fabidae View MSA
124067836 5270 Rosid View MSA
123741436 5271 Pentapetalae View MSA
122791943 5272 Eudicot View MSA
121347296 5274 Embryophyte View MSA
123380523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain